RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SPPL2CQ8IUH8 684 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 WDSUB1Q8N9V3 476 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 RAB8BQ92930 207 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 FAM107BQ9H098 131 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 UBQLN3Q9H347 655 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 SAR1AQ9NR31 198 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 POLE3Q9NRF9 147 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 SLC6A13Q9NSD5 602 aa21.07■□□□□ 0.96
SMARCB1-205ENST00000417137 TRGV5A0A0B4J1U4 118 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 A0A1B0GTH9 108 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 CLIC1O00299 241 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 HMGN4O00479 90 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 NDUFB5O43674 189 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 SLC19A2O60779 497 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 CCDC22O60826 627 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 ANGPTL1O95841 491 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 HPNP05981 417 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 GUSBP08236 651 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 PPIBP23284 216 aaKnown RBP21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 PTGS2P35354 604 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 CRATP43155 626 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 ATP12AP54707 1039 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 MAPRE2Q15555 327 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 PAGE3Q5JUK9 113 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 LRIF1Q5T3J3 769 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 TRILQ7L0X0 811 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 ZAR1Q86SH2 424 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 MISPQ8IVT2 679 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 OR4K17Q8NGC6 315 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 PNPT1Q8TCS8 783 aaKnown RBP21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 DUSP19Q8WTR2 217 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 PTGES2Q9H7Z7 377 aa21.06■□□□□ 0.96
SMARCB1-205ENST00000417137 HECTD1Q9ULT8 2610 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 A0A1B0GVC2 190 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 A0A1W2PQD3 144 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 OR14I1A6ND48 311 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 H3BNH8 94 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 SLC22A2O15244 555 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 STSP08842 583 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 CELA3AP09093 270 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 ENDOUP21128 410 aaKnown RBP21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 GCKP35557 465 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 DCTP40126 519 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 HPCAP84074 193 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 HSF1Q00613 529 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 KLF10Q13118 480 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 STX5Q13190 355 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 GTDC1Q4AE62 458 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.05■□□□□ 0.966e-15■□□□□ 9.2
SMARCB1-205ENST00000417137 OR5M10Q6IEU7 315 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 ROPN1LQ96C74 230 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 NMUR2Q9GZQ4 415 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 ZNF835Q9Y2P0 537 aa21.05■□□□□ 0.96
SMARCB1-205ENST00000417137 NAV2Q8IVL1 2488 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 TMEM247A6NEH6 219 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 AQP7O14520 342 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 PRRG2O14669 202 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 DRD4P21917 467 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 UBAP2LQ14157 1087 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 GPR68Q15743 365 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 GPAT3Q53EU6 434 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 COX20Q5RI15 118 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 APOOLQ6UXV4 268 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 MTERF4Q7Z6M4 381 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 DPP10Q8N608 796 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 OIT3Q8WWZ8 545 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 SARAFQ96BY9 339 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 TRNT1Q96Q11 434 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 ZNF350Q9GZX5 532 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 DSN1Q9H410 356 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 CORO2BQ9UQ03 480 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 MRPS18CQ9Y3D5 142 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 WDR45Q9Y484 360 aa21.04■□□□□ 0.96
SMARCB1-205ENST00000417137 EXPH5Q8NEV8 1989 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 A0A1B0GUH1 482 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 EVPLLA8MZ36 301 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 NR2F1P10589 423 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 MSX1P28360 303 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 SRD5A2P31213 254 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 DSCR4P56555 118 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 FADDQ13158 208 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 GNA13Q14344 377 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 KLHL26Q53HC5 615 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 AP1ARQ63HQ0 302 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 Q6ZPB1 254 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 NEIL3Q8TAT5 605 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 PMM1Q92871 262 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 AURKBQ96GD4 344 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 MED11Q9P086 117 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 SLAMF8Q9P0V8 285 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 DKKL1Q9UK85 242 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 FBXL2Q9UKC9 423 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 MKLN1Q9UL63 735 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 DTNAQ9Y4J8 743 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 CAPN7Q9Y6W3 813 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 EML6Q6ZMW3 1958 aa21.03■□□□□ 0.96
SMARCB1-205ENST00000417137 NINQ8N4C6 2090 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 IGLV3-32A0A0A0MS00 114 aa21.02■□□□□ 0.96
SMARCB1-205ENST00000417137 TRGV8A0A0C4DH27 118 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms