RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 CCNJQ5T5M9 372 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 RPTNQ6XPR3 784 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 MARCH3Q86UD3 253 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 ZNF527Q8NB42 609 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 FAM83FQ8NEG4 500 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 OR5D16Q8NGK9 328 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 OR9I1Q8NGQ6 314 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 OR4C3Q8NH37 302 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 PHF10Q8WUB8 498 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 CCDC120Q96HB5 630 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 ITCHQ96J02 903 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 PHF12Q96QT6 1004 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 INPP5KQ9BT40 448 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 OR2B2Q9GZK3 357 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 HOXD1Q9GZZ0 328 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 EXD2Q9NVH0 621 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 TMEM45AQ9NWC5 275 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 DCTN4Q9UJW0 460 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 FBXL2Q9UKC9 423 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 TRIM33Q9UPN9 1127 aa16.4■□□□□ 0.22
SEMA3B-201ENST00000416295 SCDO00767 359 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 ADAM10O14672 748 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 ZG16O60844 167 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 OXSR1O95747 527 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 ANGPTL1O95841 491 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 RNF224P0DH78 156 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 TROVE2P10155 538 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 ZFP36L2P47974 494 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 KHKP50053 298 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 ANXA11P50995 505 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 TXNL4AP83876 142 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 RCAN2Q14206 197 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 GXYLT1Q4G148 440 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 TIGD2Q4W5G0 525 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 WIPI1Q5MNZ9 446 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 ATAD3BQ5T9A4 648 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 OR5M10Q6IEU7 315 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 ZNF621Q6ZSS3 439 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 ZAR1Q86SH2 424 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 MISPQ8IVT2 679 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 FADS6Q8N9I5 356 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 CHDHQ8NE62 594 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 OR5M9Q8NGP3 310 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 OR14L1PQ8NHC6 308 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 THOC1Q96FV9 657 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 OR51I1Q9H343 314 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 SERHL2Q9H4I8 314 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 RABEP2Q9H5N1 569 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 PTGES2Q9H7Z7 377 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 PNPLA3Q9NST1 481 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 FBXO34Q9NWN3 711 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 TAS2R10Q9NYW0 307 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 DKKL1Q9UK85 242 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 MRPS18CQ9Y3D5 142 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 HRH3Q9Y5N1 445 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 KCNE3Q9Y6H6 103 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 UNC79Q9P2D8 2635 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 NINQ8N4C6 2090 aa16.39■□□□□ 0.21
SEMA3B-201ENST00000416295 IGLV3-32A0A0A0MS00 114 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 A0A1W2PQD3 144 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 NDUFB5O43674 189 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 WDR1O75083 606 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 ACTL6AO96019 429 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 DPP4P27487 766 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 CDKN2CP42773 168 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 SMSP52788 366 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 DSCR4P56555 118 aaPredicted RBP16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 SQLEQ14534 574 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 GANABQ14697 944 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 FLYWCH1Q4VC44 716 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 EIPR1Q53HC9 387 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 NHSL2Q5HYW2 709 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 EMC4Q5J8M3 183 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 APOOLQ6UXV4 268 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 C3P1Q6ZMU1 363 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 C16orf62Q7Z3J2 963 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 YRDCQ86U90 279 aaKnown RBP16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 IFNEQ86WN2 208 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 OR2M3Q8NG83 312 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 RFWD2Q8NHY2 731 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 DUSP19Q8WTR2 217 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 DMRTA2Q96SC8 542 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 SDF2Q99470 211 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 DSN1Q9H410 356 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 CCDC134Q9H6E4 229 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 TNFRSF10DQ9UBN6 386 aa16.38■□□□□ 0.21
SEMA3B-201ENST00000416295 A0A0G2JND7 137 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 ANP32DO95626 131 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 KRT75O95678 551 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 VIMP08670 466 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 HOXD4P09016 255 aaPredicted RBP16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 ZCCHC18P0CG32 403 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 GABRA1P14867 456 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 ACVR2AP27037 513 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 DCTP40126 519 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 MAGEA8P43361 318 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 GUCY1A3Q02108 690 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 CRYZQ08257 329 aaKnown RBP16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 ARHGAP11BQ3KRB8 267 aa16.37■□□□□ 0.21
SEMA3B-201ENST00000416295 C6orf10Q5SRN2 563 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms