RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 SNX8Q9Y5X2 465 aa2.56□□□□□ -2
APP-207ENST00000415997 FKBP7Q9Y680 259 aa2.56□□□□□ -2
APP-207ENST00000415997 SLC22A7Q9Y694 548 aa2.56□□□□□ -2
APP-207ENST00000415997 MYCBP2O75592 4640 aa2.56□□□□□ -2
APP-207ENST00000415997 DYNC1H1Q14204 4646 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 NPIPA5A0A0B4J1W7 369 aa2.55□□□□□ -2
APP-207ENST00000415997 TRBV5-4A0A0C4DH59 114 aa2.55□□□□□ -2
APP-207ENST00000415997 LOC285095A0A1B0GVY8 99 aa2.55□□□□□ -2
APP-207ENST00000415997 FAM170AA1A519 330 aa2.55□□□□□ -2
APP-207ENST00000415997 SLC22A20A6NK97 555 aa2.55□□□□□ -2
APP-207ENST00000415997 SIGLEC16A6NMB1 481 aa2.55□□□□□ -2
APP-207ENST00000415997 IFITM10A6NMD0 228 aa2.55□□□□□ -2
APP-207ENST00000415997 NPIPA7E9PJI5 369 aa2.55□□□□□ -2
APP-207ENST00000415997 H3BQV1 296 aa2.55□□□□□ -2
APP-207ENST00000415997 MYO1CO00159 1063 aa2.55□□□□□ -2
APP-207ENST00000415997 ABCD4O14678 606 aa2.55□□□□□ -2
APP-207ENST00000415997 HAT1O14929 419 aa2.55□□□□□ -2
APP-207ENST00000415997 TRAF3IP2O43734 574 aaPredicted RBP2.55□□□□□ -2
APP-207ENST00000415997 KIF5CO60282 957 aa2.55□□□□□ -2
APP-207ENST00000415997 GALR3O60755 368 aaPredicted RBP2.55□□□□□ -2
APP-207ENST00000415997 REM1O75628 298 aa2.55□□□□□ -2
APP-207ENST00000415997 TRAPPC6AO75865 159 aa2.55□□□□□ -2
APP-207ENST00000415997 SRP72O76094 671 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 NDST3O95803 873 aa2.55□□□□□ -2
APP-207ENST00000415997 PNMA6AP0CW24 399 aaPredicted RBP2.55□□□□□ -2
APP-207ENST00000415997 NPIPA8P0DM63 369 aa2.55□□□□□ -2
APP-207ENST00000415997 PKMP14618 531 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 JAK1P23458 1154 aa2.55□□□□□ -2
APP-207ENST00000415997 CCND1P24385 295 aa2.55□□□□□ -2
APP-207ENST00000415997 CCNCP24863 283 aa2.55□□□□□ -2
APP-207ENST00000415997 PPP2R1BP30154 601 aa2.55□□□□□ -2
APP-207ENST00000415997 DEKP35659 375 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 SUMO2P61956 95 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 LMO4P61968 165 aa2.55□□□□□ -2
APP-207ENST00000415997 RPL7AP62424 266 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 SIRPAP78324 504 aa2.55□□□□□ -2
APP-207ENST00000415997 TNFRSF17Q02223 184 aa2.55□□□□□ -2
APP-207ENST00000415997 ZP4Q12836 540 aa2.55□□□□□ -2
APP-207ENST00000415997 CCNIQ14094 377 aa2.55□□□□□ -2
APP-207ENST00000415997 PTPRCAPQ14761 206 aa2.55□□□□□ -2
APP-207ENST00000415997 SEC23BQ15437 767 aa2.55□□□□□ -2
APP-207ENST00000415997 BCL2A1Q16548 175 aa2.55□□□□□ -2
APP-207ENST00000415997 DPYSL2Q16555 572 aa2.55□□□□□ -2
APP-207ENST00000415997 NTRK2Q16620 822 aa2.55□□□□□ -2
APP-207ENST00000415997 EXOC3L2Q2M3D2 409 aa2.55□□□□□ -2
APP-207ENST00000415997 CTU2Q2VPK5 515 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 COBLL1Q53SF7 1204 aa2.55□□□□□ -2
APP-207ENST00000415997 KHDC1LQ5JSQ8 128 aa2.55□□□□□ -2
APP-207ENST00000415997 KLF17Q5JT82 389 aaPredicted RBP2.55□□□□□ -2
APP-207ENST00000415997 NAA35Q5VZE5 725 aa2.55□□□□□ -2
APP-207ENST00000415997 FAHD2BQ6P2I3 314 aaPredicted RBP2.55□□□□□ -2
APP-207ENST00000415997 FAM173BQ6P4H8 233 aa2.55□□□□□ -2
APP-207ENST00000415997 TMCO3Q6UWJ1 677 aa2.55□□□□□ -2
APP-207ENST00000415997 RANBP10Q6VN20 620 aa2.55□□□□□ -2
APP-207ENST00000415997 RBMS3Q6XE24 437 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 HSDL2Q6YN16 418 aa2.55□□□□□ -2
APP-207ENST00000415997 Q6ZSR9 355 aa2.55□□□□□ -2
APP-207ENST00000415997 C9orf139Q6ZV77 190 aa2.55□□□□□ -2
APP-207ENST00000415997 TBC1D1Q86TI0 1168 aaPredicted RBP2.55□□□□□ -2
APP-207ENST00000415997 NOP9Q86U38 636 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 DCUN1D3Q8IWE4 304 aa2.55□□□□□ -2
APP-207ENST00000415997 DND1Q8IYX4 353 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 FBXL14Q8N1E6 418 aa2.55□□□□□ -2
APP-207ENST00000415997 ZNF786Q8N393 782 aa2.55□□□□□ -2
APP-207ENST00000415997 CLDN19Q8N6F1 224 aa2.55□□□□□ -2
APP-207ENST00000415997 ZNF321PQ8N8H1 164 aa2.55□□□□□ -2
APP-207ENST00000415997 LINC00301Q8NCQ3 95 aa2.55□□□□□ -2
APP-207ENST00000415997 MSANTD4Q8NCY6 345 aa2.55□□□□□ -2
APP-207ENST00000415997 STEAP2Q8NFT2 490 aa2.55□□□□□ -2
APP-207ENST00000415997 OR6K3Q8NGY3 331 aa2.55□□□□□ -2
APP-207ENST00000415997 OR51F2Q8NH61 342 aa2.55□□□□□ -2
APP-207ENST00000415997 LINC01006Q8NI28 216 aa2.55□□□□□ -2
APP-207ENST00000415997 MAGEC3Q8TD91 643 aa2.55□□□□□ -2
APP-207ENST00000415997 ADAMTS16Q8TE57 1224 aa2.55□□□□□ -2
APP-207ENST00000415997 PTPMT1Q8WUK0 201 aaPredicted RBP2.55□□□□□ -2
APP-207ENST00000415997 HEXDCQ8WVB3 486 aa2.55□□□□□ -2
APP-207ENST00000415997 ATL1Q8WXF7 558 aa2.55□□□□□ -2
APP-207ENST00000415997 FIG4Q92562 907 aa2.55□□□□□ -2
APP-207ENST00000415997 RERGQ96A58 199 aaPredicted RBP2.55□□□□□ -2
APP-207ENST00000415997 RHBDF1Q96CC6 855 aa2.55□□□□□ -2
APP-207ENST00000415997 NXNL1Q96CM4 212 aa2.55□□□□□ -2
APP-207ENST00000415997 FAHD2AQ96GK7 314 aa2.55□□□□□ -2
APP-207ENST00000415997 USP28Q96RU2 1077 aa2.55□□□□□ -2
APP-207ENST00000415997 COPS8Q99627 209 aa2.55□□□□□ -2
APP-207ENST00000415997 CCDC77Q9BR77 488 aa2.55□□□□□ -2
APP-207ENST00000415997 ANP32EQ9BTT0 268 aa2.55□□□□□ -2
APP-207ENST00000415997 DOHHQ9BU89 302 aa2.55□□□□□ -2
APP-207ENST00000415997 SELENOOQ9BVL4 669 aa2.55□□□□□ -2
APP-207ENST00000415997 HDHD5Q9BXW7 423 aa2.55□□□□□ -2
APP-207ENST00000415997 OR2B2Q9GZK3 357 aa2.55□□□□□ -2
APP-207ENST00000415997 VPS37BQ9H9H4 285 aa2.55□□□□□ -2
APP-207ENST00000415997 TCF7L1Q9HCS4 588 aa2.55□□□□□ -2
APP-207ENST00000415997 SIX2Q9NPC8 291 aa2.55□□□□□ -2
APP-207ENST00000415997 SLC52A3Q9NQ40 469 aa2.55□□□□□ -2
APP-207ENST00000415997 EIF2B3Q9NR50 452 aaKnown RBP2.55□□□□□ -2
APP-207ENST00000415997 DNAJC11Q9NVH1 559 aa2.55□□□□□ -2
APP-207ENST00000415997 PNPOQ9NVS9 261 aa2.55□□□□□ -2
APP-207ENST00000415997 ZNF69Q9UC07 566 aa2.55□□□□□ -2
APP-207ENST00000415997 CIDEBQ9UHD4 219 aa2.55□□□□□ -2
APP-207ENST00000415997 MCM8Q9UJA3 840 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms