RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 NUP43Q8NFH3 380 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 BBS1Q8NFJ9 593 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 OR2L5Q8NG80 312 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 OR2L8Q8NGY9 312 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 OR4Q3Q8NH05 313 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 SPRYD4Q8WW59 207 aaPredicted RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 CREB3L1Q96BA8 519 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 KCTD12Q96CX2 325 aaKnown RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 CNRIP1Q96F85 164 aaPredicted RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 MS4A3Q96HJ5 214 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 CAPNS2Q96L46 248 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 YIPF4Q9BSR8 244 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 MKRN2Q9H000 416 aaKnown RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 FOLH1BQ9HBA9 442 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 CNIH4Q9P003 139 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 IL20RAQ9UHF4 553 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 NTNG1Q9Y2I2 539 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 CDH10Q9Y6N8 788 aa9.15□□□□□ -0.94
CD44-206ENST00000415148 MUC22E2RYF6 1773 aaPredicted RBP9.15□□□□□ -0.94
CD44-206ENST00000415148 CPSF4LA6NMK7 179 aaKnown RBP9.15□□□□□ -0.95
CD44-206ENST00000415148 HIDE1A8MVS5 230 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 F3P13726 295 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 GNSP15586 552 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 ATP5A1P25705 553 aaKnown RBP9.15□□□□□ -0.95
CD44-206ENST00000415148 TEAD1P28347 426 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 P2RY2P41231 377 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 CLCNKAP51800 687 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 RRAS2P62070 204 aaPredicted RBP9.15□□□□□ -0.95
CD44-206ENST00000415148 AGERQ15109 404 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 FCN2Q15485 313 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 TRAM1Q15629 374 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 EOGTQ5NDL2 527 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 HACD4Q5VWC8 232 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 PLPP4Q5VZY2 271 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 SDE2Q6IQ49 451 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 HEPHL1Q6MZM0 1159 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 ZNF620Q6ZNG0 422 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 TMEM91Q6ZNR0 172 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 ASB18Q6ZVZ8 466 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 CREB3L2Q70SY1 520 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 ADCK2Q7Z695 626 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 VRK2Q86Y07 508 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 OR2T33Q8NG76 320 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 TTC9Q92623 222 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 ELP4Q96EB1 424 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 C16orf58Q96GQ5 468 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 TEX101Q9BY14 249 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 ACTRT3Q9BYD9 372 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 PPIL3Q9H2H8 161 aaKnown RBP9.15□□□□□ -0.95
CD44-206ENST00000415148 FN3KQ9H479 309 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 KLHL31Q9H511 634 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 CDCP1Q9H5V8 836 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 DIABLOQ9NR28 239 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 MRPL39Q9NYK5 338 aaKnown RBP9.15□□□□□ -0.95
CD44-206ENST00000415148 TNFRSF10DQ9UBN6 386 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 TEKT2Q9UIF3 430 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 KCNE3Q9Y6H6 103 aa9.15□□□□□ -0.95
CD44-206ENST00000415148 MYO10Q9HD67 2058 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 A0A0A6YYJ9 748 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 A0A1W2PS29 197 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 FABP7O15540 132 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 KCNJ13O60928 360 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 RGS9O75916 674 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 SLC2A10O95528 541 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 NDUFV2P19404 249 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ELK1P19419 428 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 TRHRP34981 398 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 BCL6P41182 706 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 RFX3P48380 749 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 HTRA4P83105 476 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 SHC2P98077 582 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 MAB21L1Q13394 359 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 TMEM107Q6UX40 140 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ZNF767PQ75MW2 155 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 LRRC28Q86X40 367 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 SLC37A3Q8NCC5 494 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 OR11H4Q8NGC9 324 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ZNF681Q96N22 645 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 LRRC3BQ96PB8 259 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 SECISBP2Q96T21 854 aaKnown RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 INSM2Q96T92 566 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 MTHFD2LQ9H903 347 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 MRPS30Q9NP92 439 aaKnown RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 CYSLTR2Q9NS75 346 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 TM7SF3Q9NS93 570 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 BABAM2Q9NXR7 383 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 NTMQ9P121 344 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 DEC1Q9P2X7 70 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 CHST2Q9Y4C5 530 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ATG4BQ9Y4P1 393 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 SIRT4Q9Y6E7 314 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 ZC3H12DA2A288 527 aaKnown RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 GLOD5A6NK44 160 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 ERI3O43414 337 aaKnown RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 RNF13O43567 381 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 PRICKLE3O43900 615 aaPredicted RBP9.14□□□□□ -0.95
CD44-206ENST00000415148 NFATC1O95644 943 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 AIFM1O95831 613 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 CLTBP09497 229 aa9.14□□□□□ -0.95
CD44-206ENST00000415148 F8A1P23610 371 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms