RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 METTL4Q8N3J2 472 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ZCCHC7Q8N3Z6 543 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 APCDD1LQ8NCL9 501 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 B3GNT7Q8NFL0 401 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 RDH11Q8TC12 318 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 M1APQ8TC57 530 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ELP5Q8TE02 316 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ADAMTS18Q8TE60 1221 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ABHD5Q8WTS1 349 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 PTPMT1Q8WUK0 201 aaPredicted RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 WDR60Q8WVS4 1066 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 TM9SF4Q92544 642 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 HTRA1Q92743 480 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 PNPLA2Q96AD5 504 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 C3orf49Q96BT1 292 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 TM4SF18Q96CE8 201 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 CCDC126Q96EE4 140 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 PPP1R36Q96LQ0 422 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 GNRHR2Q96P88 292 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 DGAT2Q96PD7 388 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 SIGLEC12Q96PQ1 595 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 NEU1Q99519 415 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 PAIP2Q9BPZ3 127 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 TMEM109Q9BVC6 243 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 DEFB126Q9BYW3 111 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 DDX31Q9H8H2 851 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 CHODLQ9H9P2 273 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 BRF2Q9HAW0 419 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 CLK4Q9HAZ1 481 aaKnown RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 MMP25Q9NPA2 562 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ADAP2Q9NPF8 381 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ASF1BQ9NVP2 202 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 STMN3Q9NZ72 180 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 AHSPQ9NZD4 102 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 HEY2Q9UBP5 337 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 VPS29Q9UBQ0 182 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 ERVK-19Q9WJR5 959 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 B3GNT3Q9Y2A9 372 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 POLR3HQ9Y535 204 aaPredicted RBP4.51□□□□□ -1.69
VPS41-205ENST00000414632 CLCA3PQ9Y6N3 262 aa4.51□□□□□ -1.69
VPS41-205ENST00000414632 NBASA2RRP1 2371 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 SVILO95425 2214 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 CCDC151A5D8V7 595 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 OR5H15A6NDH6 313 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 FAM90A18PA6NE21 464 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 FAM90A16PA6NEW6 464 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 FAM90A9PA6NNJ1 464 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 FAM90A5PA8MXJ8 464 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 NPIPB6E9PJ23 425 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 G3V3Y1 287 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 AZIN1O14977 448 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ZNHIT1O43257 154 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ITM2AO43736 263 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 KLHL41O60662 606 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ZNF354AO60765 605 aaPredicted RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 SEC22BO75396 215 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 NME6O75414 186 aaPredicted RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 OR2J2O76002 312 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 LRATO95237 230 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 HSPA4LO95757 839 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 GPR75O95800 540 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 DDAH2O95865 285 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 BPGMP07738 259 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 CYC1P08574 325 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ANXA4P09525 319 aaPredicted RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 FREM3P0C091 2139 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 CT62P0C5K7 136 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 FAM90A15PP0C7V4 464 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 FAM90A14PP0C7W9 464 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 LINC00032P0C843 101 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 MYZAPP0CAP1 466 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 UROSP10746 265 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 NEFHP12036 1026 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 NT5EP21589 574 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 GNLYP22749 145 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 PIK3R1P27986 724 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TLX1P31314 330 aaPredicted RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 PRKAR1BP31321 381 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TIA1P31483 386 aaKnown RBP eCLIP4.5□□□□□ -1.69
VPS41-205ENST00000414632 MSX2P35548 267 aaPredicted RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 FEN1P39748 380 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 RFC3P40938 356 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 TSFMP43897 325 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 TNFSF10P50591 281 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 CLCN2P51788 898 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 GPR143P51810 404 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 XKP51811 444 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 MLF1P58340 268 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 MAGOHP61326 146 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 VAMP2P63027 116 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 RPL38P63173 70 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 PLIN5Q00G26 463 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 ACSM2AQ08AH3 577 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 FOXL1Q12952 345 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 CASP8Q14790 479 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 EXOSC7Q15024 291 aaKnown RBP4.5□□□□□ -1.69
VPS41-205ENST00000414632 OR1C1Q15619 314 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 LTB4RQ15722 352 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 CHI3L2Q15782 390 aa4.5□□□□□ -1.69
VPS41-205ENST00000414632 MEP1AQ16819 746 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms