RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 EDF1O60869 148 aaKnown RBP13.4□□□□□ -0.26
CHD1-202ENST00000414220 SCN2BO60939 215 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 DPP4P27487 766 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 MSX1P28360 303 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 KHKP50053 298 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 DGKQP52824 942 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 HPCAP84074 193 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 GRAMD1BQ3KR37 738 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 FLYWCH1Q4VC44 716 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 NHSL2Q5HYW2 709 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 WIPI1Q5MNZ9 446 aaPredicted RBP13.4□□□□□ -0.26
CHD1-202ENST00000414220 EXOSC6Q5RKV6 272 aaKnown RBP13.4□□□□□ -0.26
CHD1-202ENST00000414220 OR5M10Q6IEU7 315 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 FGD2Q7Z6J4 655 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 YRDCQ86U90 279 aaKnown RBP13.4□□□□□ -0.26
CHD1-202ENST00000414220 MARCH3Q86UD3 253 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 CHERPQ8IWX8 916 aaKnown RBP13.4□□□□□ -0.26
CHD1-202ENST00000414220 FAM83FQ8NEG4 500 aaPredicted RBP13.4□□□□□ -0.26
CHD1-202ENST00000414220 OR5M9Q8NGP3 310 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 STON2Q8WXE9 905 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 RND1Q92730 232 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 OTUB1Q96FW1 271 aaPredicted RBP13.4□□□□□ -0.26
CHD1-202ENST00000414220 ITCHQ96J02 903 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 MARK4Q96L34 752 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 TEX37Q96LM6 180 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 OR2B2Q9GZK3 357 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 DSN1Q9H410 356 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 PNPLA3Q9NST1 481 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 MRGBPQ9NV56 204 aa13.4□□□□□ -0.26
CHD1-202ENST00000414220 A0A1W2PQD3 144 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 LINC01387J3KSC0 135 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 ZNHIT1O43257 154 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 STX11O75558 287 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 OXSR1O95747 527 aaPredicted RBP13.39□□□□□ -0.27
CHD1-202ENST00000414220 IGKV1D-16P01601 117 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 IL12AP29459 219 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 MAGEA8P43361 318 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 MRPL19P49406 292 aaKnown RBP13.39□□□□□ -0.27
CHD1-202ENST00000414220 GAS1P54826 345 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 PHC1P78364 1004 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 CCNJQ5T5M9 372 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 B3GNT6Q6ZMB0 384 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 MAMDC2Q7Z304 686 aaPredicted RBP13.39□□□□□ -0.27
CHD1-202ENST00000414220 MTERF4Q7Z6M4 381 aaKnown RBP13.39□□□□□ -0.27
CHD1-202ENST00000414220 GALNT10Q86SR1 603 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 MIPOL1Q8TD10 442 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 XAGE5Q8WWM1 108 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 ASB5Q8WWX0 329 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 NEURL3Q96EH8 262 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 SFXN2Q96NB2 322 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 PSMG3-AS1Q96PY0 264 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 TIMP4Q99727 224 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 OR51I1Q9H343 314 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 CAMK2AQ9UQM7 478 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 SLC6A5Q9Y345 797 aa13.39□□□□□ -0.27
CHD1-202ENST00000414220 A0A0G2JND7 137 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 TMEM247A6NEH6 219 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 GTPBP1O00178 669 aaKnown RBP13.38□□□□□ -0.27
CHD1-202ENST00000414220 VIMP08670 466 aaKnown RBP13.38□□□□□ -0.27
CHD1-202ENST00000414220 GP1BBP13224 206 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 HK1P19367 917 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 NCF2P19878 526 aaPredicted RBP13.38□□□□□ -0.27
CHD1-202ENST00000414220 CHMP24386 653 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 DCTP40126 519 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 ATP4BP51164 291 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 ATP12AP54707 1039 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 ART3Q13508 389 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 RCAN2Q14206 197 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 SQLEQ14534 574 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 ZNF630Q2M218 657 aaPredicted RBP13.38□□□□□ -0.27
CHD1-202ENST00000414220 ARHGAP11BQ3KRB8 267 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 GLYR1Q49A26 553 aaPredicted RBP13.38□□□□□ -0.27
CHD1-202ENST00000414220 C6orf10Q5SRN2 563 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 C1orf185Q5T7R7 199 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 METTL21CQ5VZV1 264 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 SAXO2Q658L1 398 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 VASNQ6EMK4 673 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 C3P1Q6ZMU1 363 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 CHMP1BQ7LBR1 199 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 CHDHQ8NE62 594 aaPredicted RBP13.38□□□□□ -0.27
CHD1-202ENST00000414220 OR2M3Q8NG83 312 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 OR5D16Q8NGK9 328 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 OR10Q1Q8NGQ4 319 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 OR4C3Q8NH37 302 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 CA5BP1Q8WTZ4 195 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 OIT3Q8WWZ8 545 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 SDF2Q99470 211 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 EBF4Q9BQW3 602 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 RAD21L1Q9H4I0 556 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 NPHS2Q9NP85 383 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 MED11Q9P086 117 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 SPRR3Q9UBC9 169 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 PLEKHB1Q9UF11 243 aaPredicted RBP13.38□□□□□ -0.27
CHD1-202ENST00000414220 DCTN4Q9UJW0 460 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 FBXL2Q9UKC9 423 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 LIPT1Q9Y234 373 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 NINQ8N4C6 2090 aa13.38□□□□□ -0.27
CHD1-202ENST00000414220 A0A087WZY1 265 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms