RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CCDC134Q9H6E4 229 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 UGT1A7Q9HAW7 530 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KCNK9Q9NPC2 374 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 BABAM2Q9NXR7 383 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 IFNKQ9P0W0 207 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 HSPB7Q9UBY9 170 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FTSJ1Q9UET6 329 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CNOT8Q9UFF9 292 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PRSS50Q9UI38 385 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 GPR132Q9UNW8 380 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SORCS3Q9UPU3 1222 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 MOKQ9UQ07 419 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RCE1Q9Y256 329 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 MRPS18CQ9Y3D5 142 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 OR10H1Q9Y4A9 318 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TSSC4Q9Y5U2 329 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ALG5Q9Y673 324 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RIMS1Q86UR5 1692 aaKnown RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 WRNQ14191 1432 aaPredicted RBP eCLIP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 IFT140Q96RY7 1462 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TRBV11-1A0A0K0K1C0 115 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1B0GVL5 298 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SMCO3A2RU48 225 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 METTL21EPA6NDL7 271 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 NKX6-3A6NJ46 265 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PATE3B3GLJ2 98 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 E5RJQ4 531 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PPIAL4DF5H284 164 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 M0QZ92 97 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 M0R036 132 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CDC7O00311 574 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SCDO00767 359 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 KCNK3O14649 394 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 IMPA2O14732 288 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TRIM24O15164 1050 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CTDSPLO15194 276 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 RS1O15537 224 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ADAM12O43184 909 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 DLEU1O43261 78 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 N4BP1O75113 896 aaKnown RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 BANF1O75531 89 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SULT1C4O75897 302 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 DCTN3O75935 186 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 RAD17O75943 681 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ACSL3O95573 720 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TSPAN12O95859 305 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TXNDC12O95881 172 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ADAP00813 363 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 IFNA21P01568 189 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ALDOAP04075 364 aaKnown RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 HOXC4P09017 264 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 OCM2P0CE71 109 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ACP5P13686 325 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 GTF2F2P13984 249 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ARSAP15289 507 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CYP11B1P15538 503 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PROZP22891 400 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 GABRR1P24046 479 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MMP11P24347 488 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ECHS1P30084 290 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SSTR2P30874 369 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SDHAP31040 664 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 OR1D2P34982 312 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ACVR1BP36896 505 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 COILP38432 576 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MAGEA12P43365 314 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 RFX3P48380 749 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SELENOPP49908 381 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PPOXP50336 477 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 CDC42P60953 191 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 VLDLRP98155 873 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MYBPC1Q00872 1141 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SLC6A3Q01959 620 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 NAAAQ02083 359 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 NHLH2Q02577 135 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 EGR4Q05215 589 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 FPGSQ05932 587 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ARHGAP1Q07960 439 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SREBF2Q12772 1141 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 BNIP2Q12982 314 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 FOXE3Q13461 319 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 RUNX2Q13950 521 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 GRB7Q14451 532 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 KPNB1Q14974 876 aaKnown RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 TAF13Q15543 124 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 MICBQ29980 383 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SOWAHAQ2M3V2 549 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ZSCAN23Q3MJ62 389 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 LIN52Q52LA3 116 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 C6orf226Q5I0X4 101 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 DNLZQ5SXM8 178 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 LRIF1Q5T3J3 769 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ABLIM2Q6H8Q1 611 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 DHRS7BQ6IAN0 325 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ASPHD2Q6ICH7 369 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ACSM5Q6NUN0 579 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ADAM5Q6NVV9 412 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF585AQ6P3V2 769 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 SYCE2Q6PIF2 218 aa3.36□□□□□ -1.87
SF3B1-203ENST00000414174 PRSS55Q6UWB4 352 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms