RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	CBX6	O95503	412 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	OXSR1	O95747	527 aa	Predicted RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	BCHE	P06276	602 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	TFPT	P0C1Z6	253 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	ARAF	P10398	606 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	CALB2	P22676	271 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	DCT	P40126	519 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	DNASE1L1	P49184	302 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	ATP12A	P54707	1039 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	CBX1	P83916	185 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	PLGLB1	Q02325	96 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	SELPLG	Q14242	412 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	SYPL1	Q16563	259 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	ZNF630	Q2M218	657 aa	Predicted RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	BICRAL	Q6AI39	1079 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	TYW3	Q6IPR3	259 aa	Known RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	FAM180A	Q6UWF9	173 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	ZAR1	Q86SH2	424 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	SERPINA11	Q86U17	422 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	METTL25	Q8N6Q8	603 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	ANKFN1	Q8N957	763 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	OR10A6	Q8NH74	314 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	GRHL3	Q8TE85	626 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	SLC38A5	Q8WUX1	472 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	RNF138	Q8WVD3	245 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	OIT3	Q8WWZ8	545 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	PMM1	Q92871	262 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	DTNBP1	Q96EV8	351 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	BBC3	Q96PG8	261 aa	Predicted RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	TRIM8	Q9BZR9	551 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	TMEM38A	Q9H6F2	299 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	KAT8	Q9H7Z6	458 aa	Known RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	CACYBP	Q9HB71	228 aa	Known RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	SDHAF3	Q9NRP4	125 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	DEPP	Q9NTK1	212 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	FLRT3	Q9NZU0	649 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	MKLN1	Q9UL63	735 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	L3MBTL1	Q9Y468	752 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	WIF1	Q9Y5W5	379 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.05	□□□□□ -0.48
SF1-206	ENST00000413725	MPDZ	O75970	2070 aa		12.05	□□□□□ -0.48
SF1-206	ENST00000413725	MED12	Q93074	2177 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	NPIPA5	A0A0B4J1W7	369 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725		A0A0G2JMM0	328 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725		A0A1W2PPB8	328 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725		A0A1W2PQD3	144 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725		A0A1W2PRS3	328 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	PRAMEF27	A3QJZ7	478 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	TTLL8	A6PVC2	850 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	KIR3DP1	A8MWS1	328 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	ALG1L2	C9J202	215 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	NPIPA7	E9PJI5	369 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725		H3BNH8	94 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	ACOT7	O00154	380 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	FCMR	O60667	390 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	CRYAB	P02511	175 aa	Known RBP	12.04	□□□□□ -0.48
SF1-206	ENST00000413725	CHRM4	P08173	479 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	NUDT7	P0C024	238 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	NPIPA8	P0DM63	369 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	ENDOU	P21128	410 aa	Known RBP	12.04	□□□□□ -0.48
SF1-206	ENST00000413725	SLC6A2	P23975	617 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	ELAVL4	P26378	380 aa	Known RBP	12.04	□□□□□ -0.48
SF1-206	ENST00000413725	PTGDS	P41222	190 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	CDK6	Q00534	326 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	RBBP4	Q09028	425 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	RABL3	Q5HYI8	236 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	COLEC12	Q5KU26	742 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	PRAMEF8	Q5VWM4	474 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	PRAMEF7	Q5VXH5	474 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	C16orf89	Q6UX73	402 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	FRRS1	Q6ZNA5	592 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	NET1	Q7Z628	596 aa	Predicted RBP	12.04	□□□□□ -0.48
SF1-206	ENST00000413725	MISP	Q8IVT2	679 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	SLC30A8	Q8IWU4	369 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	ZNF614	Q8N883	585 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	ZFP62	Q8NB50	900 aa	Predicted RBP	12.04	□□□□□ -0.48
SF1-206	ENST00000413725	C11orf65	Q8NCR3	313 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	OR4C3	Q8NH37	302 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	MAL2	Q969L2	176 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	TMEM19	Q96HH6	336 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	TMEM41A	Q96HV5	264 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	JSRP1	Q96MG2	331 aa	Predicted RBP	12.04	□□□□□ -0.48
SF1-206	ENST00000413725	FRMD6	Q96NE9	622 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	GPATCH1	Q9BRR8	931 aa	Known RBP	12.04	□□□□□ -0.48
SF1-206	ENST00000413725	SAP130	Q9H0E3	1048 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	SLC38A1	Q9H2H9	487 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	PROK2	Q9HC23	129 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	GALNT9	Q9HCQ5	603 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	TUBA8	Q9NY65	449 aa	Predicted RBP	12.04	□□□□□ -0.48
SF1-206	ENST00000413725	PPP4R1L	Q9P1A2	415 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	B4GALT7	Q9UBV7	327 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	ANGPT4	Q9Y264	503 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	KALRN	O60229	2985 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725	ESPL1	Q14674	2120 aa		12.04	□□□□□ -0.48
SF1-206	ENST00000413725		A0A0G2JPF8	293 aa		12.03	□□□□□ -0.48
SF1-206	ENST00000413725	PINLYP	A6NC86	204 aa		12.03	□□□□□ -0.48
SF1-206	ENST00000413725	CCT8L1P	A6NM43	557 aa		12.03	□□□□□ -0.48
SF1-206	ENST00000413725	HNRNPCL2	B2RXH8	293 aa		12.03	□□□□□ -0.48
SF1-206	ENST00000413725	HNRNPCL3	B7ZW38	293 aa		12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms