RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 MAPK1IP1LQ8NDC0 245 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 OR10D3Q8NH80 312 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 AKAP1Q92667 903 aaKnown RBP eCLIP10.87□□□□□ -0.67
LIMS2-210ENST00000413578 HOXB13Q92826 284 aaPredicted RBP10.87□□□□□ -0.67
LIMS2-210ENST00000413578 NPAS1Q99742 590 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 GPR52Q9Y2T5 361 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 NBEAL1Q6ZS30 2694 aa10.87□□□□□ -0.67
LIMS2-210ENST00000413578 GNG14A0A1W2PPG7 69 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 SERTM1A2A2V5 107 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 C7orf72A4D263 438 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 ALG1L2C9J202 215 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 EIF1AYO14602 144 aaKnown RBP10.86□□□□□ -0.67
LIMS2-210ENST00000413578 ULK1O75385 1050 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 GCM2O75603 506 aaPredicted RBP10.86□□□□□ -0.67
LIMS2-210ENST00000413578 UTS2O95399 124 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 ANGPTL1O95841 491 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 IFI6P09912 130 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 PHBP35232 272 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 MAP3K8P41279 467 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 EIF1AXP47813 144 aaKnown RBP10.86□□□□□ -0.67
LIMS2-210ENST00000413578 NCBP2P52298 156 aaKnown RBP eCLIP10.86□□□□□ -0.67
LIMS2-210ENST00000413578 ACSM2AQ08AH3 577 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 C17orf67Q0P5P2 114 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 ETFDHQ16134 617 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 SGCBQ16585 318 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 CLEC12BQ2HXU8 276 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 ZNF678Q5SXM1 525 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 LGSNQ5TDP6 509 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 ACSM2BQ68CK6 577 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 FAM71E1Q6IPT2 247 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 MFSD12Q6NUT3 480 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 TMEM107Q6UX40 140 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 SEZ6L2Q6UXD5 910 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 BEND4Q6ZU67 534 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 GALNT10Q86SR1 603 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 RAB3IL1Q8TBN0 382 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 TMEM237Q96Q45 408 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 PAFAH2Q99487 392 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 REG4Q9BYZ8 158 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 GLIPR2Q9H4G4 154 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 Q9N2J8 555 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 GLRX2Q9NS18 164 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 PAQR5Q9NXK6 330 aaPredicted RBP10.86□□□□□ -0.67
LIMS2-210ENST00000413578 SENP1Q9P0U3 644 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 DMGDHQ9UI17 866 aaKnown RBP10.86□□□□□ -0.67
LIMS2-210ENST00000413578 ZNF180Q9UJW8 692 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 PYCARDQ9ULZ3 195 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 LAMP3Q9UQV4 416 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 SVEP1Q4LDE5 3571 aa10.86□□□□□ -0.67
LIMS2-210ENST00000413578 CD5LO43866 347 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 JUNP05412 331 aaKnown RBP10.85□□□□□ -0.67
LIMS2-210ENST00000413578 NGFRP08138 427 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 INHBAP08476 426 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 ANXA4P09525 319 aaPredicted RBP10.85□□□□□ -0.67
LIMS2-210ENST00000413578 AGTR1P30556 359 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 SERPINB9P50453 376 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 PSMD4P55036 377 aaKnown RBP10.85□□□□□ -0.67
LIMS2-210ENST00000413578 CTBP2P56545 445 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 RAC1P63000 192 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 VEZF1Q14119 521 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 GRAMD1BQ3KR37 738 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 NCMAPQ5T1S8 102 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 DNAJC14Q6Y2X3 702 aaPredicted RBP10.85□□□□□ -0.67
LIMS2-210ENST00000413578 GPRIN3Q6ZVF9 776 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 HIPK1Q86Z02 1210 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 GABRG1Q8N1C3 465 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 OR2V1Q8NHB1 315 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 METTL6Q8TCB7 284 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 DCAKDQ8WVC6 231 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 S100PBPQ96BU1 408 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 ELP4Q96EB1 424 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 BBS4Q96RK4 519 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 KLHDC3Q9BQ90 382 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 EBPLQ9BY08 206 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 CDC42EP4Q9H3Q1 356 aaKnown RBP10.85□□□□□ -0.67
LIMS2-210ENST00000413578 MCTS1Q9ULC4 181 aaKnown RBP10.85□□□□□ -0.67
LIMS2-210ENST00000413578 GRID1Q9ULK0 1009 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 VDAC3Q9Y277 283 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 CHD3Q12873 2000 aaKnown RBP10.85□□□□□ -0.67
LIMS2-210ENST00000413578 HEATR5AQ86XA9 2040 aa10.85□□□□□ -0.67
LIMS2-210ENST00000413578 A0A087WZY1 265 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 A0A096LNT2 108 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 A0A0J9YW62 118 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 GXYLT2A0PJZ3 443 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 TTC36A6NLP5 189 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 RNF212BA8MTL3 300 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 TRIM49D1C9J1S8 452 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 TLX2O43763 284 aaPredicted RBP10.84□□□□□ -0.67
LIMS2-210ENST00000413578 CXCL13O43927 109 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 DLX3O60479 287 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 SUPT7LO94864 414 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 PLGP00747 810 aaPredicted RBP10.84□□□□□ -0.67
LIMS2-210ENST00000413578 IDUAP35475 653 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 CLK3P49761 638 aaKnown RBP10.84□□□□□ -0.67
LIMS2-210ENST00000413578 SLC7A5Q01650 507 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 ZNF763Q0D2J5 394 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 HMBOX1Q6NT76 420 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 EXOC3L1Q86VI1 746 aa10.84□□□□□ -0.67
LIMS2-210ENST00000413578 WDR75Q8IWA0 830 aaKnown RBP10.84□□□□□ -0.67
LIMS2-210ENST00000413578 POC1BQ8TC44 478 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms