RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 APOBEC3BQ9UH17 382 aaKnown RBP15.57■□□□□ 0.08
LIMS2-208ENST00000410011 ZNF443Q9Y2A4 671 aaPredicted RBP15.57■□□□□ 0.08
LIMS2-208ENST00000410011 OR1A2Q9Y585 309 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 ALG5Q9Y673 324 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 SMIM30A4D0T7 59 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 A6NL46 340 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 GTPBP1O00178 669 aaKnown RBP15.57■□□□□ 0.08
LIMS2-208ENST00000410011 FCMRO60667 390 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 RGS9O75916 674 aaPredicted RBP15.57■□□□□ 0.08
LIMS2-208ENST00000410011 PCDH8O95206 1070 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 CH25HO95992 272 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 THBS1P07996 1170 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 CMPK1P30085 196 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 PTGER1P34995 402 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 PDX1P52945 283 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 DUSP8Q13202 625 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 CLPPQ16740 277 aaPredicted RBP15.57■□□□□ 0.08
LIMS2-208ENST00000410011 ARHGAP11BQ3KRB8 267 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 Q5BKY6 102 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 FAM78AQ5JUQ0 283 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 MFSD12Q6NUT3 480 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 GET4Q7L5D6 327 aaPredicted RBP15.57■□□□□ 0.08
LIMS2-208ENST00000410011 VASH1Q7L8A9 365 aaPredicted RBP15.57■□□□□ 0.08
LIMS2-208ENST00000410011 YIPF7Q8N8F6 280 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 CREB3L1Q96BA8 519 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 ASB16Q96NS5 453 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 MS4A4EQ96PG1 132 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 MACROD1Q9BQ69 325 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 NDEL1Q9GZM8 345 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 UBQLN3Q9H347 655 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 OSGEPL1Q9H4B0 414 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 ING3Q9NXR8 418 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 SLC17A4Q9Y2C5 497 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 TRPM6Q9BX84 2022 aa15.57■□□□□ 0.08
LIMS2-208ENST00000410011 A0A1W2PS29 197 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 OR6C70A6NIJ9 312 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 RNF13O43567 381 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 ATP6V1E1P36543 226 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 GPR4P46093 362 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 BTG1P62324 171 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 CAMK1Q14012 370 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 EFR3AQ14156 821 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 KRT33BQ14525 404 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 PDGFRLQ15198 375 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 IRF4Q15306 451 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 TRAM1Q15629 374 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 EIPR1Q53HC9 387 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 CXXC5Q7LFL8 322 aaKnown RBP15.56■□□□□ 0.08
LIMS2-208ENST00000410011 ADGRD2Q7Z7M1 963 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 FBXL6Q8N531 539 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 TMEM255BQ8WV15 326 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 GTPBP2Q9BX10 602 aaKnown RBP15.56■□□□□ 0.08
LIMS2-208ENST00000410011 FOLH1BQ9HBA9 442 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 CYSLTR2Q9NS75 346 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 HOXB3P14651 431 aaPredicted RBP15.56■□□□□ 0.08
LIMS2-208ENST00000410011 F8A1P23610 371 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 PEBP1P30086 187 aaKnown RBP15.56■□□□□ 0.08
LIMS2-208ENST00000410011 ZNF791Q3KP31 576 aaPredicted RBP15.56■□□□□ 0.08
LIMS2-208ENST00000410011 HBMQ6B0K9 141 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 SMARCD3Q6STE5 483 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 MEPCEQ7L2J0 689 aaKnown RBP15.56■□□□□ 0.08
LIMS2-208ENST00000410011 LRRC28Q86X40 367 aaPredicted RBP15.56■□□□□ 0.08
LIMS2-208ENST00000410011 KLBQ86Z14 1044 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 CPOQ8IVL8 374 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 UBE2J2Q8N2K1 259 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 HDDC3Q8N4P3 179 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 BBS1Q8NFJ9 593 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 OR5M3Q8NGP4 307 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 GAL3ST3Q96A11 431 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 RSPH9Q9H1X1 276 aaPredicted RBP15.56■□□□□ 0.08
LIMS2-208ENST00000410011 KIR3DX1Q9H7L2 352 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 EQTNQ9NQ60 294 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 OBP2AQ9NY56 170 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 CSNK1G3Q9Y6M4 447 aa15.56■□□□□ 0.08
LIMS2-208ENST00000410011 CEACAM5P06731 702 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 ASGR2P07307 311 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 CAPZA2P47755 286 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 GCGRP47871 477 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 RFX3P48380 749 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 RRAS2P62070 204 aaPredicted RBP15.55■□□□□ 0.08
LIMS2-208ENST00000410011 LRRC32Q14392 662 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 RPE65Q16518 533 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 HACD4Q5VWC8 232 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 RPL13AP3Q6NVV1 102 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 OR2L13Q8N349 312 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 SIRT6Q8N6T7 355 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 SMARCD2Q92925 531 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 UPRTQ96BW1 309 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 SAMD8Q96LT4 415 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 TIMP4Q99727 224 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.55■□□□□ 0.08
LIMS2-208ENST00000410011 CACYBPQ9HB71 228 aaKnown RBP15.55■□□□□ 0.08
LIMS2-208ENST00000410011 RPRD1BQ9NQG5 326 aaKnown RBP15.55■□□□□ 0.08
LIMS2-208ENST00000410011 NLKQ9UBE8 527 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 HEBP2Q9Y5Z4 205 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 CDC42EP2O14613 210 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 MID1O15344 667 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 NTN1O95631 604 aa15.55■□□□□ 0.08
LIMS2-208ENST00000410011 PAICSP22234 425 aaKnown RBP15.55■□□□□ 0.08
LIMS2-208ENST00000410011 ZNF136P52737 540 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms