RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PPP4R1LQ9P1A2 415 aa18.09■□□□□ 0.49
PDLIM2-207ENST00000409417 HRH3Q9Y5N1 445 aa18.09■□□□□ 0.49
PDLIM2-207ENST00000409417 TRGV5A0A0B4J1U4 118 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 OR14I1A6ND48 311 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 AQP7O14520 342 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 ZNHIT1O43257 154 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 LRRTM2O43300 516 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 SEMA7AO75326 666 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 OXSR1O95747 527 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 C1QCP02747 245 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 HPGDP15428 266 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 CAPN3P20807 821 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 MAGEA8P43361 318 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 SF3A3Q12874 501 aaKnown RBP eCLIP18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 SLC2A7Q6PXP3 512 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 NEIL3Q8TAT5 605 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 XAGE5Q8WWM1 108 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 RAB8BQ92930 207 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 RELTQ969Z4 430 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 DTNBP1Q96EV8 351 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 TPT1P8Q9HAU6 139 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 FBXL2Q9UKC9 423 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 SLC5A6Q9Y289 635 aa18.08■□□□□ 0.49
PDLIM2-207ENST00000409417 A0A096LPI6 279 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 TRGV8A0A0C4DH27 118 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 A0A1B0GUH1 482 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 A0A1W2PP18 115 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 HMGN4O00479 90 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 PRRG2O14669 202 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 ANGPTL1O95841 491 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 CD1EP15812 388 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 CA7P43166 264 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 ANXA11P50995 505 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 C17orf67Q0P5P2 114 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 STX5Q13190 355 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 TOMM20Q15388 145 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 ARHGAP11BQ3KRB8 267 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 C1QL3Q5VWW1 255 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 C16orf62Q7Z3J2 963 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 FAM57AQ8TBR7 257 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 DUSP19Q8WTR2 217 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 DIDO1Q9BTC0 2240 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 PAIP1Q9H074 479 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 SLC6A15Q9H2J7 730 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 EXO5Q9H790 373 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 ERRFI1Q9UJM3 462 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 TINAGQ9UJW2 476 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 PCDHB14Q9Y5E9 798 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 COL12A1Q99715 3063 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 IGLV3-32A0A0A0MS00 114 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 C17orf51A8MQB3 221 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 B4DXG7 233 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 SCDO00767 359 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 NDUFB5O43674 189 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 STX11O75558 287 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 AGFG2O95081 481 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 GUSBP08236 651 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 UBAP2LQ14157 1087 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 C3AR1Q16581 482 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 GTDC1Q4AE62 458 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 FLYWCH1Q4VC44 716 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 AP1ARQ63HQ0 302 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 FADS6Q8N9I5 356 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 ZNF527Q8NB42 609 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 FAM83FQ8NEG4 500 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 OR4K17Q8NGC6 315 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 TSPEARQ8WU66 669 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 NMUR2Q9GZQ4 415 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 ZNF350Q9GZX5 532 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 SPTAN1Q13813 2472 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 DOPEY1Q5JWR5 2465 aa18.07■□□□□ 0.48
PDLIM2-207ENST00000409417 A0A1W2PQD3 144 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 NPIPA2E9PIF3 369 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 NPIPB9F8W1W9 429 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 NPIPA3F8WFD2 350 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 BCKDKO14874 412 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 HOXB9P17482 250 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 ENDOUP21128 410 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 SRD5A2P31213 254 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 DCTP40126 519 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 MVDP53602 400 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 ATP12AP54707 1039 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 KLHL26Q53HC5 615 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 EIPR1Q53HC9 387 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 PAGE3Q5JUK9 113 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 COX20Q5RI15 118 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 LRIF1Q5T3J3 769 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 DOLPP1Q86YN1 238 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 PNPT1Q8TCS8 783 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 SARAFQ96BY9 339 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 AURKBQ96GD4 344 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 OR2B2Q9GZK3 357 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 DSN1Q9H410 356 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 POLE3Q9NRF9 147 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 ACAD8Q9UKU7 415 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 LIPT1Q9Y234 373 aa18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 MRPS18CQ9Y3D5 142 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-207ENST00000409417 MYO7BQ6PIF6 2116 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 USP9YO00507 2555 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 FCMRO60667 390 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms