RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 TBL1XR1Q9BZK7 514 aa18.53■□□□□ 0.56
PTCD3-202ENST00000409326 ZNF350Q9GZX5 532 aa18.53■□□□□ 0.56
PTCD3-202ENST00000409326 DEFB127Q9H1M4 99 aa18.53■□□□□ 0.56
PTCD3-202ENST00000409326 SDHAF3Q9NRP4 125 aa18.53■□□□□ 0.56
PTCD3-202ENST00000409326 SLC25A37Q9NYZ2 338 aa18.53■□□□□ 0.56
PTCD3-202ENST00000409326 HRH3Q9Y5N1 445 aa18.53■□□□□ 0.56
PTCD3-202ENST00000409326 HIVEP3Q5T1R4 2406 aa18.53■□□□□ 0.56
PTCD3-202ENST00000409326 ALG1L2C9J202 215 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 CDC40O60508 579 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTCD3-202ENST00000409326 CCDC22O60826 627 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 STX11O75558 287 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 IGHG3P01860 377 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 GUSBP08236 651 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 GDF1P27539 372 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 DCTP40126 519 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 MAPRE2Q15555 327 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 FLYWCH1Q4VC44 716 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.52■□□□□ 0.56
PTCD3-202ENST00000409326 APOOLQ6UXV4 268 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 MARCH3Q86UD3 253 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 RETREG3Q86VR2 466 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 PLCZ1Q86YW0 608 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 MSRB3Q8IXL7 192 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 ROPN1LQ96C74 230 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 RTN4RQ9BZR6 473 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 HOXD1Q9GZZ0 328 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 VAPAQ9P0L0 249 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 PPP4R1LQ9P1A2 415 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 GMEB1Q9Y692 573 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 CAPN7Q9Y6W3 813 aa18.52■□□□□ 0.56
PTCD3-202ENST00000409326 A0A1W2PQD3 144 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 NPIPB9F8W1W9 429 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 CLIC1O00299 241 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 SCDO00767 359 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 CELA3AP09093 270 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 HPGDP15428 266 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 HSF1Q00613 529 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 SLC10A1Q14973 349 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 DLEU7Q6UYE1 221 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 ZNF527Q8NB42 609 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 RAD21L1Q9H4I0 556 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 ACKR4Q9NPB9 350 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 POLE3Q9NRF9 147 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 ARMCX1Q9P291 453 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 LIPT1Q9Y234 373 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 LIPGQ9Y5X9 500 aa18.51■□□□□ 0.55
PTCD3-202ENST00000409326 NPIPA5A0A0B4J1W7 369 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 PRAMEF27A3QJZ7 478 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 C17orf51A8MQB3 221 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 B4DXG7 233 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 NPIPA7E9PJI5 369 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 CBR3O75828 277 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 ZIC2O95409 532 aaPredicted RBP18.5■□□□□ 0.55
PTCD3-202ENST00000409326 ANGPTL1O95841 491 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 HPNP05981 417 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 NPIPA8P0DM63 369 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 ETFAP13804 333 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 PPIBP23284 216 aaKnown RBP18.5■□□□□ 0.55
PTCD3-202ENST00000409326 CRATP43155 626 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 ATP12AP54707 1039 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 RBPJQ06330 500 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 C17orf67Q0P5P2 114 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 FADDQ13158 208 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 STX5Q13190 355 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 COQ5Q5HYK3 327 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 AP1ARQ63HQ0 302 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 ARHGAP11AQ6P4F7 1023 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 TRILQ7L0X0 811 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 DHDDSQ86SQ9 333 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 CHERPQ8IWX8 916 aaKnown RBP18.5■□□□□ 0.55
PTCD3-202ENST00000409326 FADS6Q8N9I5 356 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 DTNBP1Q96EV8 351 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 HHATLQ9HCP6 504 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 FBXL2Q9UKC9 423 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 WDR45Q9Y484 360 aa18.5■□□□□ 0.55
PTCD3-202ENST00000409326 IGLV3-32A0A0A0MS00 114 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 A0A1B0GTH9 108 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 A0A1B0GVC2 190 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 BBIP1A8MTZ0 92 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 FBP2O00757 339 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 NDUFB5O43674 189 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 KIAA0513O60268 411 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 FCMRO60667 390 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 HCN1O60741 890 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 PDE9AO76083 593 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 DSTNP60981 165 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 HPCAP84074 193 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 RGNQ15493 299 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 GPR68Q15743 365 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 GPAT3Q53EU6 434 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 OR5M10Q6IEU7 315 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 TYW3Q6IPR3 259 aaKnown RBP18.49■□□□□ 0.55
PTCD3-202ENST00000409326 FRRS1Q6ZNA5 592 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 OLIG3Q7RTU3 272 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 PIGWQ7Z7B1 504 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 MTDHQ86UE4 582 aaKnown RBP18.49■□□□□ 0.55
PTCD3-202ENST00000409326 SNX32Q86XE0 403 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 MISPQ8IVT2 679 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 OR4K17Q8NGC6 315 aa18.49■□□□□ 0.55
PTCD3-202ENST00000409326 DUSP19Q8WTR2 217 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms