RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 GATAD2AQ86YP4 633 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 SPRYD4Q8WW59 207 aaPredicted RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 ACOT11Q8WXI4 607 aaPredicted RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 MOAP1Q96BY2 351 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 SNX18Q96RF0 628 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 OR2B2Q9GZK3 357 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 TOR4AQ9NXH8 423 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 ZNF624Q9P2J8 865 aaPredicted RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 EXOSC1Q9Y3B2 195 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 HMX3A6NHT5 357 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 FAM183AA6NL82 134 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PLRG1O43660 514 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 CTSVO60911 334 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 ZNF888P0CJ79 500 aaPredicted RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 TRAPPC2P0DI81 140 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 TRAPPC2BP0DI82 140 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 TSFMP43897 325 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 C1DQ13901 141 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 CDK10Q15131 360 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PUS10Q3MIT2 529 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 TBRG1Q3YBR2 411 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 CRTC2Q53ET0 693 aaPredicted RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 ZNF322Q6U7Q0 402 aaPredicted RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 SIX5Q8N196 739 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 GDPD1Q8N9F7 314 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PFN4Q8NHR9 129 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 TEX47Q8TBZ9 253 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 SLC41A3Q96GZ6 507 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PHOX2BQ99453 314 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 FAIM2Q9BWQ8 316 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 ACTRT3Q9BYD9 372 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 KIR3DX1Q9H7L2 352 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 ENTPD4Q9Y227 616 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 MRPS2Q9Y399 296 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 DMDP11532 3685 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 HEATR5AQ86XA9 2040 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 A0A0G2JK05 382 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PLOD3O60568 738 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 RFPL3O75679 317 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PCDH8O95206 1070 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 SLC2A5P22732 501 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 EVX1P49640 407 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PPP2CBP62714 309 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PPP2CAP67775 309 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 CSTF1Q05048 431 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 RUNX2Q13950 521 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 PDGFRLQ15198 375 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 CNIH2Q6PI25 160 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 TRIM69Q86WT6 500 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 HDDC3Q8N4P3 179 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 NT5CQ8TCD5 201 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 UFD1Q92890 307 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 DMRTB1Q96MA1 342 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 HDHD5Q9BXW7 423 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 MED20Q9H944 212 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 IL21RQ9HBE5 538 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 NUFIP1Q9UHK0 495 aaKnown RBP9.17□□□□□ -0.94
MSH2-202ENST00000406134 SLC7A7Q9UM01 511 aa9.17□□□□□ -0.94
MSH2-202ENST00000406134 LINC00854A0A1B0GVQ3 168 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 A6NCN8 305 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 FABP12A6NFH5 140 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 LANCL1O43813 399 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 SC5DO75845 299 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 CSF2P04141 144 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 EIF2S1P05198 315 aaKnown RBP9.16□□□□□ -0.94
MSH2-202ENST00000406134 ASGR2P07307 311 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 BTCP35070 178 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 CDH11P55287 796 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 DUSP8Q13202 625 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 RUNX3Q13761 415 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 ARHGAP11BQ3KRB8 267 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 CCNJQ5T5M9 372 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 CDC73Q6P1J9 531 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 SMARCD3Q6STE5 483 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 THSD4Q6ZMP0 1018 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 PRSS41Q7RTY9 318 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 RAB43Q86YS6 212 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 TMEM99Q8N816 258 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 CCL4L1Q8NHW4 92 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 HERVK_113Q902F9 699 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 C1GALT1C1Q96EU7 318 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 TTYH2Q9BSA4 534 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 TMED9Q9BVK6 235 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 SPATA5L1Q9BVQ7 753 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 WDR70Q9NW82 654 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 C2orf92A0A1B0GVN3 265 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 GRXCR1A8MXD5 290 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 E9PI62 339 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 TFECO14948 347 aaPredicted RBP9.16□□□□□ -0.94
MSH2-202ENST00000406134 TSPAN19P0C672 248 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 CSNK2A2P19784 350 aaPredicted RBP9.16□□□□□ -0.94
MSH2-202ENST00000406134 STAT5AP42229 794 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 RNF144AP50876 292 aaPredicted RBP9.16□□□□□ -0.94
MSH2-202ENST00000406134 TNFRSF17Q02223 184 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 MGAT2Q10469 447 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 FCRL6Q6DN72 434 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 NIPAL3Q6P499 406 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 UBE2J2Q8N2K1 259 aa9.16□□□□□ -0.94
MSH2-202ENST00000406134 RFLNBQ8N5W9 214 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms