RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 GALNT9Q9HCQ5 603 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 MKLN1Q9UL63 735 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 WDR45Q9Y484 360 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 C15orf38-AP3S2A0A0A6YYH1 394 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 ADAM10O14672 748 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 KIAA0513O60268 411 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 SNX4O95219 450 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 RASAL1O95294 804 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 OXSR1O95747 527 aaPredicted RBP26.85■■□□□ 1.89
USP42-202ENST00000404008 BCHEP06276 602 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 ESRRAP11474 423 aaPredicted RBP26.85■■□□□ 1.89
USP42-202ENST00000404008 DCTP40126 519 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 GPR68Q15743 365 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 LRRC74BQ6ZQY2 392 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 ARPINQ7Z6K5 226 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 SERPINA11Q86U17 422 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 FAM98AQ8NCA5 519 aaKnown RBP26.85■■□□□ 1.89
USP42-202ENST00000404008 SLC38A1Q9H2H9 487 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 TMEM38AQ9H6F2 299 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 SPTA1P02549 2419 aa26.85■■□□□ 1.89
USP42-202ENST00000404008 NPIPA5A0A0B4J1W7 369 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 TMEM247A6NEH6 219 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 NPIPA7E9PJI5 369 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 TRIM3O75382 744 aaPredicted RBP26.84■■□□□ 1.89
USP42-202ENST00000404008 NPIPA8P0DM63 369 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 ARAFP10398 606 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 GAS1P54826 345 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 PMP22Q01453 160 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 CHRNEQ04844 493 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 GNA13Q14344 377 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 CYP51A1Q16850 503 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 APOOLQ6UXV4 268 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 NET1Q7Z628 596 aaPredicted RBP26.84■■□□□ 1.89
USP42-202ENST00000404008 ZFP62Q8NB50 900 aaPredicted RBP26.84■■□□□ 1.89
USP42-202ENST00000404008 OR10A6Q8NH74 314 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 TMEM19Q96HH6 336 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 FRMD6Q96NE9 622 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 TAAR6Q96RI8 345 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 TUBA8Q9NY65 449 aaPredicted RBP26.84■■□□□ 1.89
USP42-202ENST00000404008 CALML5Q9NZT1 146 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.84■■□□□ 1.89
USP42-202ENST00000404008 FAM208BQ5VWN6 2430 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 T-ENOLP0DO92 83 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 GZMMP51124 257 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 MNAT1P51948 309 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 CRISP3P54108 245 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 ATP12AP54707 1039 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 FOXO1Q12778 655 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 PTOV1Q86YD1 416 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 ZNF619Q8N2I2 560 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 FBXO27Q8NI29 283 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 TREX2Q9BQ50 279 aaPredicted RBP26.84■■□□□ 1.89
USP42-202ENST00000404008 ECSITQ9BQ95 431 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 TBL1XR1Q9BZK7 514 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 RTN4RQ9BZR6 473 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 WIF1Q9Y5W5 379 aa26.84■■□□□ 1.89
USP42-202ENST00000404008 ALG1L2C9J202 215 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 SCDO00767 359 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 SCO2O43819 266 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 CALB2P22676 271 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 CLK3P49761 638 aaKnown RBP26.83■■□□□ 1.88
USP42-202ENST00000404008 MARCH3Q86UD3 253 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 PACS2Q86VP3 889 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 CALHM3Q86XJ0 350 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 METTL25Q8N6Q8 603 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 ZNF527Q8NB42 609 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 TMEM41AQ96HV5 264 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 SPATA9Q9BWV2 254 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 CMTM6Q9NX76 183 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 KCNE5Q9UJ90 142 aa26.83■■□□□ 1.88
USP42-202ENST00000404008 RALYQ9UKM9 306 aaKnown RBP26.83■■□□□ 1.88
USP42-202ENST00000404008 DSPPQ9NZW4 1301 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 A0A1W2PQD3 144 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 C2orf72A6NCS6 295 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 CCT8L1PA6NM43 557 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 UGT2B17O75795 530 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 HPGDP15428 266 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 PSME3P61289 254 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 CDK6Q00534 326 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 ZNF141Q15928 474 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 ZNF630Q2M218 657 aaPredicted RBP26.82■■□□□ 1.88
USP42-202ENST00000404008 KLHL26Q53HC5 615 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 FNDC7Q5VTL7 733 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 PRAMEF8Q5VWM4 474 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 PRAMEF7Q5VXH5 474 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 SLC15A3Q8IY34 581 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 NFKBIDQ8NI38 313 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 ZNF597Q96LX8 424 aa26.82■■□□□ 1.88
USP42-202ENST00000404008 BOKQ9UMX3 212 aaPredicted RBP26.82■■□□□ 1.88
USP42-202ENST00000404008 NCKAP5O14513 1909 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 CENPVL1A0A0U1RR11 272 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 LRRC3CA6NJW4 275 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 UBOX5O94941 541 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 PRB1P04280 392 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 RFC3P40938 356 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 SLC7A2P52569 658 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 RBBP4Q09028 425 aa26.81■■□□□ 1.88
USP42-202ENST00000404008 INPP5JQ15735 1006 aaPredicted RBP26.81■■□□□ 1.88
USP42-202ENST00000404008 RPS26P11Q5JNZ5 115 aaPredicted RBP26.81■■□□□ 1.88
USP42-202ENST00000404008 ZZZ3Q8IYH5 903 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms