RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SNAPC3Q92966 411 aa18.53■□□□□ 0.56
CCDC47-202ENST00000403162 C17orf62Q9BQA9 187 aa18.53■□□□□ 0.56
CCDC47-202ENST00000403162 PRR14Q9BWN1 585 aa18.53■□□□□ 0.56
CCDC47-202ENST00000403162 AICDAQ9GZX7 198 aa18.53■□□□□ 0.56
CCDC47-202ENST00000403162 ZDHHC4Q9NPG8 344 aa18.53■□□□□ 0.56
CCDC47-202ENST00000403162 IL20Q9NYY1 176 aa18.53■□□□□ 0.56
CCDC47-202ENST00000403162 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.53■□□□□ 0.56
CCDC47-202ENST00000403162 WASHC1A8K0Z3 465 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 ISM1B1AKI9 464 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 PPM1DO15297 605 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 ADRB3P13945 408 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 BTBD16Q32M84 506 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 SLC30A6Q6NXT4 461 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 WASH2PQ6VEQ5 465 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 TMEM91Q6ZNR0 172 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 ERN2Q76MJ5 926 aaKnown RBP18.52■□□□□ 0.56
CCDC47-202ENST00000403162 RRM2BQ7LG56 351 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 SPRYD4Q8WW59 207 aaPredicted RBP18.52■□□□□ 0.56
CCDC47-202ENST00000403162 QRSL1Q9H0R6 528 aaKnown RBP18.52■□□□□ 0.56
CCDC47-202ENST00000403162 CBLCQ9ULV8 474 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 LOC102723532A0A0G2JNH3 316 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 A0A0X1KG70 313 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 LRIT2A6NDA9 550 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 OR2B3O76000 313 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 P2RX3P56373 397 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 CTBP2P56545 445 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 BDH1Q02338 343 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 TDGQ13569 410 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 ZNF791Q3KP31 576 aaPredicted RBP18.52■□□□□ 0.56
CCDC47-202ENST00000403162 TMEM52BQ4KMG9 183 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 TMEM35AQ53FP2 167 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 METRNLQ641Q3 311 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 LAMTOR1Q6IAA8 161 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 ZNF322Q6U7Q0 402 aaPredicted RBP18.52■□□□□ 0.56
CCDC47-202ENST00000403162 C11orf74Q86VG3 221 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 AKAP1Q92667 903 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC47-202ENST00000403162 SLC38A1Q9H2H9 487 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 C8orf33Q9H7E9 229 aaPredicted RBP18.52■□□□□ 0.56
CCDC47-202ENST00000403162 SLC13A4Q9UKG4 626 aa18.52■□□□□ 0.56
CCDC47-202ENST00000403162 CD8B2A6NJW9 211 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 CPSF4LA6NMK7 179 aaKnown RBP18.51■□□□□ 0.55
CCDC47-202ENST00000403162 INMT-MINDY4F8WBC2 141 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 CD8BP10966 210 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 IFNA8P32881 189 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 BTG1P62324 171 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 FZD5Q13467 585 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 INSL4Q14641 139 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 DECR1Q16698 335 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 PGGHGQ32M88 737 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 KIAA1161Q6NSJ0 714 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 LYPD8Q6UX82 237 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 OR8D1Q8WZ84 308 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 GPR55Q9Y2T6 319 aaPredicted RBP18.51■□□□□ 0.55
CCDC47-202ENST00000403162 KCNE3Q9Y6H6 103 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 MYO10Q9HD67 2058 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 C2orf92A0A1B0GVN3 265 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 KLF4O43474 513 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 PRKRAO75569 313 aaKnown RBP18.51■□□□□ 0.55
CCDC47-202ENST00000403162 CH25HO95992 272 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 ELK1P19419 428 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 MTNR1BP49286 362 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 ARFIP1P53367 373 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 SEC13P55735 322 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 SLC9A5Q14940 896 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 FAM209AQ5JX71 171 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 ZNF57Q68EA5 555 aaPredicted RBP18.51■□□□□ 0.55
CCDC47-202ENST00000403162 ADAMTSL4Q6UY14 1074 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 LRRTM4Q86VH4 590 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 TTLQ8NG68 377 aa18.51■□□□□ 0.55
CCDC47-202ENST00000403162 ACOT11Q8WXI4 607 aaPredicted RBP18.51■□□□□ 0.55
CCDC47-202ENST00000403162 SECISBP2Q96T21 854 aaKnown RBP18.51■□□□□ 0.55
CCDC47-202ENST00000403162 THAP10Q9P2Z0 257 aaPredicted RBP18.51■□□□□ 0.55
CCDC47-202ENST00000403162 GLOD5A6NK44 160 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 AKR7A2O43488 359 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 FRS3O43559 492 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 ERAL1O75616 437 aaKnown RBP18.5■□□□□ 0.55
CCDC47-202ENST00000403162 RGS9O75916 674 aaPredicted RBP18.5■□□□□ 0.55
CCDC47-202ENST00000403162 SERPIND1P05546 499 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 TNFRSF4P43489 277 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 C9orf64Q5T6V5 341 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 PIP5KL1Q5T9C9 394 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 ZNF620Q6ZNG0 422 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 VRK2Q86Y07 508 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 LINC01555Q8NAE3 123 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 OR4M1Q8NGD0 313 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 CNRIP1Q96F85 164 aaPredicted RBP18.5■□□□□ 0.55
CCDC47-202ENST00000403162 C16orf58Q96GQ5 468 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 MED30Q96HR3 178 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 OR7D2Q96RA2 312 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 GALNT9Q9HCQ5 603 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 CALML5Q9NZT1 146 aa18.5■□□□□ 0.55
CCDC47-202ENST00000403162 J3QRE1 110 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 K7EQS6 105 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 NTN1O95631 604 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 SRFP11831 508 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 HK1P19367 917 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 SLC6A1P30531 599 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 TRHRP34981 398 aaPredicted RBP18.49■□□□□ 0.55
CCDC47-202ENST00000403162 PTGER1P34995 402 aa18.49■□□□□ 0.55
CCDC47-202ENST00000403162 RNF144AP50876 292 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms