RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 KRT78Q8N1N4 520 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 MEIOBQ8N635 442 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SLC38A2Q96QD8 506 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SLC6A16Q9GZN6 736 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ACSL5Q9ULC5 683 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SLC9B1P1A6NJY1 282 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ZNF593O00488 134 aaPredicted RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 PI15O43692 258 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ANKRD34CP0C6C1 535 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SNRPBP14678 240 aaKnown RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 RAB40BQ12829 278 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SYPL1Q16563 259 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 GSG1Q2KHT4 349 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SLC25A35Q3KQZ1 300 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 LIPJQ5W064 366 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 CRTC1Q6UUV9 634 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 RNF165Q6ZSG1 346 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 LRRC28Q86X40 367 aaPredicted RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 FBXO15Q8NCQ5 510 aaPredicted RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 C12orf57Q99622 126 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ARL6Q9H0F7 186 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 DDX31Q9H8H2 851 aaKnown RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ZDHHC3Q9NYG2 299 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 EXOSC1Q9Y3B2 195 aaKnown RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 MEIKINA0A087WXM9 373 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ARPC4-TTLL3A0A0A6YYG9 625 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 GPR37L1O60883 481 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SLC2A10O95528 541 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 NR2F1P10589 423 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ALPPL2P10696 532 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 FGF9P31371 208 aaPredicted RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 PUS10Q3MIT2 529 aaKnown RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 FAAP20Q6NZ36 180 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 SLC27A4Q6P1M0 643 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ZNF784Q8NCA9 323 aaPredicted RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 HERVK_113Q902F9 699 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 NEIL2Q969S2 332 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 EXOSC8Q96B26 276 aaKnown RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ORAI3Q9BRQ5 295 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 QRSL1Q9H0R6 528 aaKnown RBP16.01■□□□□ 0.15
PTPRA-205ENST00000399903 ABCG4Q9H172 646 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 TNFRSF10DQ9UBN6 386 aa16.01■□□□□ 0.15
PTPRA-205ENST00000399903 A0A1B0GVI7 797 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 TMEM129A0AVI4 362 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ANTXRLA6NF34 631 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 A8MVJ9 347 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ZP1P60852 638 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 LGALS3BPQ08380 585 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ELOAQ14241 798 aaKnown RBP16■□□□□ 0.15
PTPRA-205ENST00000399903 SLBPQ14493 270 aaKnown RBP eCLIP16■□□□□ 0.15
PTPRA-205ENST00000399903 OR2AP1Q8NGE2 309 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 FAM46AQ96IP4 442 aaKnown RBP16■□□□□ 0.15
PTPRA-205ENST00000399903 BHLHE41Q9C0J9 482 aaPredicted RBP16■□□□□ 0.15
PTPRA-205ENST00000399903 TMEM38AQ9H6F2 299 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 AUNIPQ9H7T9 357 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 FANCFQ9NPI8 374 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ALPK3Q96L96 1907 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 A0A0G2JN53 185 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ZNF98A6NK75 572 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 SPDEFO95238 335 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 IGSF6O95976 241 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 WNT1P04628 370 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 MRPL3P09001 348 aaKnown RBP16■□□□□ 0.15
PTPRA-205ENST00000399903 CBX5P45973 191 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ERVK-25P63136 954 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 GNA13Q14344 377 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 RELL2Q8NC24 303 aaPredicted RBP16■□□□□ 0.15
PTPRA-205ENST00000399903 PLA2G15Q8NCC3 412 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ZNF671Q8TAW3 534 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 C16orf78Q8WTQ4 265 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 CYSLTR2Q9NS75 346 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 TEX10Q9NXF1 929 aaPredicted RBP16■□□□□ 0.15
PTPRA-205ENST00000399903 MLXQ9UH92 298 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ZNF175Q9Y473 711 aa16■□□□□ 0.15
PTPRA-205ENST00000399903 ABHD14A-ACY1A0A1B0GW23 586 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 FAM74A7A6NL05 159 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 LINC01387J3KSC0 135 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 F8A1P23610 371 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 MMP12P39900 470 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 B2MP61769 119 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 FAM74A3Q4VXF1 159 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 LINGO2Q7L985 606 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 CEACAM19Q7Z692 300 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 ZNF454Q8N9F8 522 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 ZNF740Q8NDX6 193 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 OR8K3Q8NH51 312 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 KLK6Q92876 244 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 RSPO3Q9BXY4 272 aaPredicted RBP15.99■□□□□ 0.15
PTPRA-205ENST00000399903 SHARPINQ9H0F6 387 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 ZNF768Q9H5H4 540 aaKnown RBP15.99■□□□□ 0.15
PTPRA-205ENST00000399903 MED20Q9H944 212 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 POMT2Q9UKY4 750 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 ANXA2P2A6NMY6 339 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 SOCS6O14544 535 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 ARPC1BO15143 372 aaKnown RBP15.99■□□□□ 0.15
PTPRA-205ENST00000399903 CXCL2P19875 107 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 AP1S1P61966 158 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 MED27Q6P2C8 311 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 SERPINA12Q8IW75 414 aa15.99■□□□□ 0.15
PTPRA-205ENST00000399903 OR10H4Q8NGA5 316 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms