RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 C16orf62Q7Z3J2 963 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 MTERF4Q7Z6M4 381 aaKnown RBP23.27■■□□□ 1.32
U2AF1-203ENST00000398137 ZAR1Q86SH2 424 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 FAM110BQ8TC76 370 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 CGREF1Q99674 301 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 TRIM8Q9BZR9 551 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 IKZF5Q9H5V7 419 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 METTL7AQ9H8H3 244 aa23.27■■□□□ 1.32
U2AF1-203ENST00000398137 NCOA6Q14686 2063 aaPredicted RBP23.27■■□□□ 1.32
U2AF1-203ENST00000398137 CENPEQ02224 2701 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 GTF3C1Q12789 2109 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 NPIPA5E9PKD4 350 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 PEX1O43933 1283 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 HS6ST1O60243 411 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 SLC19A2O60779 497 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 AGR2O95994 175 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 RPP38P78345 283 aaKnown RBP23.26■■□□□ 1.31
U2AF1-203ENST00000398137 ALDH6A1Q02252 535 aaKnown RBP23.26■■□□□ 1.31
U2AF1-203ENST00000398137 C3AR1Q16581 482 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 ATAD3BQ5T9A4 648 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 SLC39A3Q9BRY0 314 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 EXD2Q9NVH0 621 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 CNIH4Q9P003 139 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 NPIPA1Q9UND3 350 aa23.26■■□□□ 1.31
U2AF1-203ENST00000398137 PRAMEF25A6NGN4 478 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 FXYD1O00168 92 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 CCL21O00585 134 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 SOX30O94993 753 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 UTS2O95399 124 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 PPIBP23284 216 aaKnown RBP23.25■■□□□ 1.31
U2AF1-203ENST00000398137 PRDX6P30041 224 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 TXNL4AP83876 142 aaKnown RBP23.25■■□□□ 1.31
U2AF1-203ENST00000398137 FUT5Q11128 374 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 RGNQ15493 299 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.25■■□□□ 1.31
U2AF1-203ENST00000398137 Q6ZPB1 254 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-203ENST00000398137 OLIG3Q7RTU3 272 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 FGD2Q7Z6J4 655 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 SULF2Q8IWU5 870 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 PCYOX1LQ8NBM8 494 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 CHDHQ8NE62 594 aaPredicted RBP23.25■■□□□ 1.31
U2AF1-203ENST00000398137 TMCO6Q96DC7 493 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 CMTM5Q96DZ9 223 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 SECISBP2Q96T21 854 aaKnown RBP23.25■■□□□ 1.31
U2AF1-203ENST00000398137 G6PC3Q9BUM1 346 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 RAD21L1Q9H4I0 556 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 SH3BGRL2Q9UJC5 107 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 TINAGQ9UJW2 476 aa23.25■■□□□ 1.31
U2AF1-203ENST00000398137 PCNX1Q96RV3 2341 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 AIM2O14862 343 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 AK1P00568 194 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 ATP6V1C1P21283 382 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 CASP3P42574 277 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 MAGEA8P43361 318 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 DNASE1L1P49184 302 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 MEOX1P50221 254 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 MTPNP58546 118 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 DSTNP60981 165 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 HSF1Q00613 529 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 GRAMD1BQ3KR37 738 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 KRTCAP3Q53RY4 240 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 RUNDC3AQ59EK9 446 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 HEPHL1Q6MZM0 1159 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 ANKRD27Q96NW4 1050 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 SDF2Q99470 211 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 PROK2Q9HC23 129 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 KLRF1Q9NZS2 232 aa23.24■■□□□ 1.31
U2AF1-203ENST00000398137 EML6Q6ZMW3 1958 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 NPIPA5A0A0B4J1W7 369 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 PRAMEF27A3QJZ7 478 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 PINLYPA6NC86 204 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 NPIPA7E9PJI5 369 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 KLRC4-KLRK1H3BQV0 150 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 NPIPA8P0DM63 369 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 CNR1P21554 472 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 KCNJ2P63252 427 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 ADORA2A-AS1P86434 159 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 SELPLGQ14242 412 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.23■■□□□ 1.31
U2AF1-203ENST00000398137 ARHGAP11BQ3KRB8 267 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 FAM91A1Q658Y4 838 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 C10orf111Q8N326 155 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 FITM2Q8N6M3 262 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 ANKFN1Q8N957 763 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 OR2M7Q8NG81 312 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 ROPN1LQ96C74 230 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 LRRC58Q96CX6 371 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 FAM173AQ9BQD7 235 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 DOHHQ9BU89 302 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 OSBPL11Q9BXB4 747 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 GALNT9Q9HCQ5 603 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 ARL8BQ9NVJ2 186 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 CORO2BQ9UQ03 480 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 GMEB1Q9Y692 573 aa23.23■■□□□ 1.31
U2AF1-203ENST00000398137 EVPLLA8MZ36 301 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 NUDT7P0C024 238 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 GRNP28799 593 aaKnown RBP23.22■■□□□ 1.31
U2AF1-203ENST00000398137 EVI2BP34910 448 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 RFC3P40938 356 aa23.22■■□□□ 1.31
U2AF1-203ENST00000398137 CPA2P48052 419 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms