RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SEC16AO15027 2179 aa17.96■□□□□ 0.47
PDLIM2-204ENST00000397760 TFPTP0C1Z6 253 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 OCM2P0CE71 109 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 OCMP0CE72 109 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 AQP1P29972 269 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 FMO3P31513 532 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 MAN2A2P49641 1150 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 SELENOWP63302 87 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 NHLH1Q02575 133 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 FAM199XQ6PEV8 388 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 WDR53Q7Z5U6 358 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 P2RY8Q86VZ1 359 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC44A2Q8IWA5 706 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC30A8Q8IWU4 369 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 LGI4Q8N135 537 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 ZNF540Q8NDQ6 660 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 RNF217Q8TC41 542 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 ADAMTS15Q8TE58 950 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC38A5Q8WUX1 472 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 MR1Q95460 341 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 OR7D2Q96RA2 312 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 CNPPD1Q9BV87 410 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 DDA1Q9BW61 102 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC26A1Q9H2B4 701 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 GIN1Q9NXP7 522 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 P2RX2Q9UBL9 471 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 ANGPT4Q9Y264 503 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 PCNX2A6NKB5 2137 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 A0A1W2PNU3 283 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 TMEM247A6NEH6 219 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 VSTM2BA6NLU5 285 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 CLDN24A6NM45 220 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 A8MUA0 341 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 C17orf105B2RV13 164 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 C5orf58C9J3I9 102 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 HRKO00198 91 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 BCHEP06276 602 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 HEXBP07686 556 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 RPP38P78345 283 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 REEP3Q6NUK4 255 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 CDC73Q6P1J9 531 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 CCDC80Q76M96 950 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 GALNT10Q86SR1 603 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 EGFL6Q8IUX8 553 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 TMEM151BQ8IW70 566 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 CENPSQ8N2Z9 138 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 GALNT6Q8NCL4 622 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 WDR36Q8NI36 951 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 PTPMT1Q8WUK0 201 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 ZNF578Q96N58 590 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 ZNF300Q96RE9 604 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 ACOT13Q9NPJ3 140 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 GPN3Q9UHW5 284 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 KCNE3Q9Y6H6 103 aa17.95■□□□□ 0.46
PDLIM2-204ENST00000397760 TEX51A0A1B0GUA7 166 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 DUXAA6NLW8 204 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 IDSB3KWA1 339 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 M0R3G1 203 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 ASNA1O43681 348 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 FAM20BO75063 409 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 CNOT3O75175 753 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 COQ9O75208 318 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 STK17BO94768 372 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 SSTR4P31391 388 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 MLLT10P55197 1068 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 DUSP8Q13202 625 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 UBE2UQ5VVX9 321 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 MRPL14Q6P1L8 145 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC16A11Q8NCK7 471 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 PHF10Q8WUB8 498 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC9A6Q92581 669 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 TMEM19Q96HH6 336 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 AKIP1Q9NQ31 210 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 EXD2Q9NVH0 621 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 ERVK-19Q9WJR5 959 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 CORINQ9Y5Q5 1042 aa17.94■□□□□ 0.46
PDLIM2-204ENST00000397760 PRAMEF27A3QJZ7 478 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 KPNA4O00629 521 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 TM4SF5O14894 197 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 DYRK3O43781 588 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC28A2O43868 658 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 GCM2O75603 506 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 MT-ND2P03891 347 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 NR2F1P10589 423 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 ANXA8P13928 327 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 ITGA2P17301 1181 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 OPRL1P41146 370 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 CRYBA2P53672 197 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 FUT7Q11130 342 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 ELAVL1Q15717 326 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 SYPL1Q16563 259 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 C3orf38Q5JPI3 329 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 FAAH2Q6GMR7 532 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 ZCCHC12Q6PEW1 402 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 IGFN1Q86VF2 1251 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 CDRT4Q8N9R6 151 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 SLC35A4Q96G79 324 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 FAM210AQ96ND0 272 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 THSD1Q9NS62 852 aa17.93■□□□□ 0.46
PDLIM2-204ENST00000397760 CLCA3PQ9Y6N3 262 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms