RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 UBQLN4Q9NRR5 601 aa19.32■□□□□ 0.68
TSPAN4-206ENST00000397408 SH3BGRL2Q9UJC5 107 aa19.32■□□□□ 0.68
TSPAN4-206ENST00000397408 FBXL2Q9UKC9 423 aa19.32■□□□□ 0.68
TSPAN4-206ENST00000397408 ZNF835Q9Y2P0 537 aa19.32■□□□□ 0.68
TSPAN4-206ENST00000397408 FREM3P0C091 2139 aa19.32■□□□□ 0.68
TSPAN4-206ENST00000397408 A0A096LPI6 279 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 NPIPA5A0A0B4J1W7 369 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 TRGV8A0A0C4DH27 118 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 ALG1L2C9J202 215 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 NPIPA7E9PJI5 369 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 CBR3O75828 277 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 ANGPTL1O95841 491 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 NPIPA8P0DM63 369 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 HPGDP15428 266 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 TBXA2RP21731 343 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 LSP1P33241 339 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 ANXA11P50995 505 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 SEC24CP53992 1094 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 FLYWCH1Q4VC44 716 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 PAGE3Q5JUK9 113 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 COX20Q5RI15 118 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 HEPHL1Q6MZM0 1159 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 GATSQ8NAP1 163 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 OR4K17Q8NGC6 315 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 TPT1P8Q9HAU6 139 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 PCDHB14Q9Y5E9 798 aa19.31■□□□□ 0.68
TSPAN4-206ENST00000397408 USP9XQ93008 2570 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 LRRK2Q5S007 2527 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 A0A1B0GVC2 190 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 A0A1W2PP18 115 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 B4DXG7 233 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 HMGN4O00479 90 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 SCDO00767 359 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 HCN1O60741 890 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 HPNP05981 417 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 DCTP40126 519 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 FUT5Q11128 374 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 UBAP2LQ14157 1087 aaKnown RBP19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 C3AR1Q16581 482 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 ARHGAP11BQ3KRB8 267 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 Q6ZPB1 254 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 OLIG3Q7RTU3 272 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 FAM107BQ9H098 131 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 TINAGQ9UJW2 476 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 BAHCC1Q9P281 2608 aa19.3■□□□□ 0.68
TSPAN4-206ENST00000397408 AQP7O14520 342 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 NDUFB5O43674 189 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 SUSD5O60279 629 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 SEMA7AO75326 666 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 STX11O75558 287 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 TPOP07202 933 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 HOXB9P17482 250 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 ENDOUP21128 410 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 MVDP53602 400 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 CASP6P55212 293 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 GNGT1P63211 74 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 TXNL4AP83876 142 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 SRSF1Q07955 248 aaKnown RBP eCLIP19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 EIPR1Q53HC9 387 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.29■□□□□ 0.685e-6■■■■□ 22.8
TSPAN4-206ENST00000397408 FAM26EQ8N5C1 309 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 FAM83FQ8NEG4 500 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 NEIL3Q8TAT5 605 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 FAM57AQ8TBR7 257 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 DUSP19Q8WTR2 217 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 ROPN1LQ96C74 230 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 ZNF350Q9GZX5 532 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 NSRP1Q9H0G5 558 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 DSN1Q9H410 356 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 SAR1AQ9NR31 198 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 MRGBPQ9NV56 204 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 SLAMF8Q9P0V8 285 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 SPRR3Q9UBC9 169 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 TNFRSF10DQ9UBN6 386 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 LEF1Q9UJU2 399 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 DKKL1Q9UK85 242 aa19.29■□□□□ 0.68
TSPAN4-206ENST00000397408 NPIPA2E9PIF3 369 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 NPIPA3F8WFD2 350 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 PRRG2O14669 202 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 FCMRO60667 390 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 AGFG2O95081 481 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 ZIC2O95409 532 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 CA7P43166 264 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 ATP12AP54707 1039 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 HPCAP84074 193 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 C17orf67Q0P5P2 114 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 GPR68Q15743 365 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 C4orf17Q53FE4 359 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 WIPI1Q5MNZ9 446 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 LRIF1Q5T3J3 769 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 SPATA21Q7Z572 469 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 YRDCQ86U90 279 aaKnown RBP19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 CD163Q86VB7 1156 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 ZNF614Q8N883 585 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 FADS6Q8N9I5 356 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 ZNF527Q8NB42 609 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 OR2M3Q8NG83 312 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 DTNBP1Q96EV8 351 aa19.28■□□□□ 0.68
TSPAN4-206ENST00000397408 OR2B2Q9GZK3 357 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms