RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 OR7A2PQ8NGA2 310 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 OR8J2Q8NGG1 315 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 MBD3L2Q8NHZ7 208 aaPredicted RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 FAM120BQ96EK7 910 aaKnown RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 RMND5BQ96G75 393 aaPredicted RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 PAIP2Q9BPZ3 127 aaKnown RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 PIGQQ9BRB3 760 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 DUSP26Q9BV47 211 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 BTBD2Q9BX70 525 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 ACTRT3Q9BYD9 372 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 UCK2Q9BZX2 261 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 HOXD1Q9GZZ0 328 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 PIGUQ9H490 435 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 AKTIPQ9H8T0 292 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 THAP1Q9NVV9 213 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 KCNN3Q9UGI6 736 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 FBXL2Q9UKC9 423 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 ITGB1BP2Q9UKP3 347 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 SNX8Q9Y5X2 465 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 ANKHD1Q8IWZ3 2542 aaKnown RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 ANKRD17O75179 2603 aaKnown RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 PDZD2O15018 2839 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 A0A1W2PQD3 144 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 TMEM120BA0PK00 339 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 TRPC5OSA6NMA1 111 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 H0Y3Z8 333 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 RNASET2O00584 256 aaKnown RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 SCO2O43819 266 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 NME6O75414 186 aaPredicted RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 AGR2O95994 175 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 AK1P00568 194 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 HMGN2P05204 90 aaKnown RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 G6PDP11413 515 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 LBPP18428 481 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 ATP6V1C1P21283 382 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 BGNP21810 368 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 CTSSP25774 331 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 ADH7P40394 386 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 LHX2P50458 406 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 CLNS1AP54105 237 aaKnown RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 POU6F2P78424 691 aaPredicted RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 TLE4Q04727 773 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 FBXL19-AS1Q494R0 122 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 EXOSC6Q5RKV6 272 aaKnown RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 ANXA8L1Q5VT79 327 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 OGFOD2Q6N063 350 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 CDC73Q6P1J9 531 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 CHMP1BQ7LBR1 199 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 MTERF4Q7Z6M4 381 aaKnown RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 SLC16A11Q8NCK7 471 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 OR2M3Q8NG83 312 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 ACTRT2Q8TDY3 377 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 DUSP19Q8WTR2 217 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 WNT2BQ93097 391 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 TESCQ96BS2 214 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 SORT1Q99523 831 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 DPY30Q9C005 99 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 MEAF6Q9HAF1 191 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 SIRT3Q9NTG7 399 aaPredicted RBP12.65□□□□□ -0.38
SEC13-204ENST00000397099 OTOGQ6ZRI0 2925 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 DOCK7Q96N67 2140 aa12.65□□□□□ -0.38
SEC13-204ENST00000397099 NUP214P35658 2090 aaPredicted RBP12.65□□□□□ -0.39
SEC13-204ENST00000397099 H3BNH8 94 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 SYT5O00445 386 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 SCDO00767 359 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 HDAC3O15379 428 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 CFLARO15519 480 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 NDUFB5O43674 189 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 ZIC3O60481 467 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 KCNK2O95069 426 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 ANGPTL1O95841 491 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 CRHP06850 196 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 ACP2P11117 423 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 ZNF708P17019 499 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 ZNF17P17021 662 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 RFX3P48380 749 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 ASCL1P50553 236 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 BST1Q10588 318 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 MPP2Q14168 576 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 LASP1Q14847 261 aaKnown RBP12.64□□□□□ -0.39
SEC13-204ENST00000397099 DUSP5Q16690 384 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 CES4AQ5XG92 561 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 OR5M10Q6IEU7 315 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 OR2A2Q6IF42 318 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 SPATA19Q7Z5L4 167 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 WDR53Q7Z5U6 358 aaPredicted RBP12.64□□□□□ -0.39
SEC13-204ENST00000397099 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 KIF18BQ86Y91 864 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 MEIOBQ8N635 442 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 ADAMTS15Q8TE58 950 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 OIT3Q8WWZ8 545 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 PIK3R3Q92569 461 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 JADE3Q92613 823 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 C1GALT1C1Q96EU7 318 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 TRIB1Q96RU8 372 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 SFXN3Q9BWM7 321 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 DSN1Q9H410 356 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 GIMAP2Q9UG22 337 aa12.64□□□□□ -0.39
SEC13-204ENST00000397099 PRSS51A0A1B0GVH4 220 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms