RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ZDHHC13Q8IUH4 622 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 ARMC10Q8N2F6 343 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 SLC15A4Q8N697 577 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 OR5K1Q8NHB7 308 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 DHRS1Q96LJ7 313 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 IP6K3Q96PC2 410 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 EPYCQ99645 322 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 POLR2J2Q9GZM3 115 aaKnown RBP12.56□□□□□ -0.4
MCF2L-209ENST00000397036 POLR2J3Q9H1A7 115 aaKnown RBP12.56□□□□□ -0.4
MCF2L-209ENST00000397036 VCXQ9H320 206 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 ASCL3Q9NQ33 180 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 UBQLN4Q9NRR5 601 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.56□□□□□ -0.4
MCF2L-209ENST00000397036 SLC13A4Q9UKG4 626 aa12.56□□□□□ -0.4
MCF2L-209ENST00000397036 CCDC88CQ9P219 2028 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 SDK2Q58EX2 2172 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 CDHR4A6H8M9 788 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 TMEM200CA6NKL6 621 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 hCG_2039718K7EN88 272 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 FMO6PO60774 539 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 SEC24DO94855 1032 aaPredicted RBP12.55□□□□□ -0.4
MCF2L-209ENST00000397036 ENDOUP21128 410 aaKnown RBP12.55□□□□□ -0.4
MCF2L-209ENST00000397036 FPR1P21462 350 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 DCTP40126 519 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 OR1E2P47887 323 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 NR0B1P51843 470 aaKnown RBP12.55□□□□□ -0.4
MCF2L-209ENST00000397036 NRG3P56975 720 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 KLHL26Q53HC5 615 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 SHQ1Q6PI26 577 aaKnown RBP12.55□□□□□ -0.4
MCF2L-209ENST00000397036 PPP1R32Q7Z5V6 425 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 ZAR1Q86SH2 424 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 CYP4Z1Q86W10 505 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 KBTBD2Q8IY47 623 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 TAGAPQ8N103 731 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 CLIP4Q8N3C7 705 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 ICA1LQ8NDH6 482 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 PHF10Q8WUB8 498 aaKnown RBP12.55□□□□□ -0.4
MCF2L-209ENST00000397036 NKD1Q969G9 470 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 TMBIM1Q969X1 311 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 C8orf44Q96CB5 159 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 PIP5K1AQ99755 562 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 MESP1Q9BRJ9 268 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 QRSL1Q9H0R6 528 aaKnown RBP12.55□□□□□ -0.4
MCF2L-209ENST00000397036 COQ10BQ9H8M1 238 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 REEP1Q9H902 201 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 OAZ3Q9UMX2 235 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 DTNAQ9Y4J8 743 aa12.55□□□□□ -0.4
MCF2L-209ENST00000397036 TRBV11-1A0A0K0K1C0 115 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 OR6C70A6NIJ9 312 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 RASAL1O95294 804 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 HPP00738 406 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 TBXA2RP21731 343 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 KRT20P35900 424 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 DLSTP36957 453 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 ARHGDIAP52565 204 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 CAMK2BQ13554 666 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 GRAMD1BQ3KR37 738 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF836Q6ZNA1 936 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 COMTD1Q86VU5 262 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 EPHX4Q8IUS5 362 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF527Q8NB42 609 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 OR4D11Q8NGI4 311 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 OR6T1Q8NGN1 323 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 GAL3ST4Q96RP7 486 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 CIB1Q99828 191 aa12.54□□□□□ -0.4
MCF2L-209ENST00000397036 NSG1A0A0A6YYJ2 146 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 LOC101059948A0A1B0GTJ6 334 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 A0A1W2PQD3 144 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 G3V2T6 193 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 PEX12O00623 359 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 PRKNO60260 465 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-209ENST00000397036 REM1O75628 298 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 TNFRSF1BP20333 461 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 ABCD3P28288 659 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 LIMS1P48059 325 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 EFR3AQ14156 821 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 FGFBP1Q14512 234 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 LRRC36Q1X8D7 754 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF440Q8IYI8 595 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 PIK3C3Q8NEB9 887 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 TOR1AIP2Q8NFQ8 470 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 OR4C3Q8NH37 302 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 ZNF184Q99676 751 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-209ENST00000397036 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 PSD2Q9BQI7 771 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 DEFB126Q9BYW3 111 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 GABARAPL1Q9H0R8 117 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 ANKRD19PQ9H560 264 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 USE1Q9NZ43 259 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 MYOTQ9UBF9 498 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 SLC35A3Q9Y2D2 325 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 NPFFR2Q9Y5X5 522 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 NINQ8N4C6 2090 aa12.53□□□□□ -0.4
MCF2L-209ENST00000397036 CENPVL1A0A0U1RR11 272 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 A0A1W2PRQ8 180 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 ARRDC5A6NEK1 342 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 SERINC4A6NH21 518 aa12.52□□□□□ -0.4
MCF2L-209ENST00000397036 FFAR1O14842 300 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms