RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ASCC1Q8N9N2 400 aaKnown RBP16.46■□□□□ 0.23
MCF2L-208ENST00000397030 RAB39BQ96DA2 213 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 DNMT3BQ9UBC3 853 aaKnown RBP16.46■□□□□ 0.23
MCF2L-208ENST00000397030 DCDC2BA2VCK2 349 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 NKX3-2P78367 333 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 SLC22A16Q86VW1 577 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 GAB3Q8WWW8 586 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 RGCCQ9H4X1 137 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 TMEM165Q9HC07 324 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 ACTR3BQ9P1U1 418 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 PAK1IP1Q9NWT1 392 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-208ENST00000397030 KIR2DS5A0A0G2JLQ3 304 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 A0A0G2JNG1 304 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 KIR2DS3K7RE56 304 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 SERPINA2P20848 420 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 PBX2P40425 430 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 KIR2DS5Q14953 304 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 COL28A1Q2UY09 1125 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 PAPD5Q8NDF8 572 aaKnown RBP16.46■□□□□ 0.23
MCF2L-208ENST00000397030 MAFAQ8NHW3 353 aaPredicted RBP16.46■□□□□ 0.23
MCF2L-208ENST00000397030 HSD17B8Q92506 261 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 SLC6A18Q96N87 628 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 SUCNR1Q9BXA5 334 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 LIN28AQ9H9Z2 209 aaKnown RBP16.46■□□□□ 0.23
MCF2L-208ENST00000397030 MYNNQ9NPC7 610 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 TMEM100Q9NV29 134 aa16.46■□□□□ 0.23
MCF2L-208ENST00000397030 DLGAP1O14490 977 aa16.46■□□□□ 0.22
MCF2L-208ENST00000397030 PTHP01270 115 aa16.46■□□□□ 0.22
MCF2L-208ENST00000397030 TDHQ8IZJ6 230 aa16.46■□□□□ 0.22
MCF2L-208ENST00000397030 POT1Q9NUX5 634 aa16.46■□□□□ 0.22
MCF2L-208ENST00000397030 CUEDC1Q9NWM3 386 aaPredicted RBP16.46■□□□□ 0.22
MCF2L-208ENST00000397030 SMAD6O43541 496 aaKnown RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 CYP1B1Q16678 543 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 NIPAL3Q6P499 406 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 COMMD6Q7Z4G1 85 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 TRIB3Q96RU7 358 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 SULT4A1Q9BR01 284 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 KCND1Q9NSA2 647 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 MROH1Q8NDA8 1641 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 MEIS3P1A6NDR6 274 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 SLC6A8P48029 635 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 HADHBP55084 474 aaKnown RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 RAB31Q13636 194 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 MANEALQ5VSG8 457 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 KIAA0907Q7Z7F0 614 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 CMTM1Q8IZ96 169 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 APIPQ96GX9 242 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 SLC30A2Q9BRI3 323 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 SLC46A2Q9BY10 475 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 ENTPD2Q9Y5L3 495 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 FRS3O43559 492 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 IFNA17P01571 189 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 EPOP01588 193 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 RAB3AP20336 220 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 RRAS2P62070 204 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 RPP30P78346 268 aaKnown RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 ZNF784Q8NCA9 323 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 LRR1Q96L50 414 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 HDHD5Q9BXW7 423 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 ZNF334Q9HCZ1 680 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 SLC22A31A6NKX4 558 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 H7C2Y5 167 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 RP2O75695 350 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 C8BP07358 591 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 CDKN2CP42773 168 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 EPHA5P54756 1037 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 ANKRD54Q6NXT1 300 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 CYB561A3Q8NBI2 242 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 ZMYND19Q96E35 227 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 CHFRQ96EP1 664 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 BCAS1O75363 584 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 LUMP51884 338 aaPredicted RBP16.45■□□□□ 0.22
MCF2L-208ENST00000397030 TMBIM6P55061 237 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 TRAM1Q15629 374 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 TMEM71Q6P5X7 295 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 ZDHHC24Q6UX98 284 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 PDZD3Q86UT5 571 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 UMODL1-AS1Q8N2C9 162 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 PREBQ9HCU5 417 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 NDUFAF4Q9P032 175 aa16.45■□□□□ 0.22
MCF2L-208ENST00000397030 F5H0A9 414 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-208ENST00000397030 TP53I3Q53FA7 332 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 DCST2Q5T1A1 773 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 CNIH4Q9P003 139 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 UCHL1P09936 223 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 CRABP1P29762 137 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 HTR5AP47898 357 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 DCDP81605 110 aaKnown RBP16.44■□□□□ 0.22
MCF2L-208ENST00000397030 DEFB109BQ30KR1 87 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 LRRTM3Q86VH5 581 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 PTERQ96BW5 349 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 SRRM3A6NNA2 597 aaPredicted RBP16.44■□□□□ 0.22
MCF2L-208ENST00000397030 M0R3H8 397 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 IGHEP01854 428 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 PTPN6P29350 595 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 OR1D5P58170 312 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 ERVFC1P60507 584 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 ESX1Q8N693 406 aa16.44■□□□□ 0.22
MCF2L-208ENST00000397030 MSI2Q96DH6 328 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms