RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ZDHHC12Q96GR4 267 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 DGAT2Q96PD7 388 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 TBC1D23Q9NUY8 699 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 FBXO34Q9NWN3 711 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 TESQ9UGI8 421 aaKnown RBP13.89□□□□□ -0.19
CBX3-202ENST00000396386 IGHV5-51A0A0C4DH38 117 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 CDHR4A6H8M9 788 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 TLX2O43763 284 aaPredicted RBP13.89□□□□□ -0.19
CBX3-202ENST00000396386 PIP5K1CO60331 668 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 FMO6PO60774 539 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 NTN1O95631 604 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 ADRA2AP08913 450 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 GADD45AP24522 165 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 CSTF2P33240 577 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■□□□□ 10.5
CBX3-202ENST00000396386 GPR4P46093 362 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 CSNK1EP49674 416 aaKnown RBP13.89□□□□□ -0.19
CBX3-202ENST00000396386 SYT14P1Q58G82 188 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 AP1ARQ63HQ0 302 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 ACSM5Q6NUN0 579 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 MRGPREQ86SM8 312 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 ADCK1Q86TW2 530 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 NRMQ8IXM6 262 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 OR8D4Q8NGM9 314 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 TMEM255BQ8WV15 326 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 LGALS12Q96DT0 336 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 TMEM80Q96HE8 168 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
CBX3-202ENST00000396386 CAPN10Q9HC96 672 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 C14orf105Q9NVL8 296 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 UCKL1Q9NWZ5 548 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 KCNE5Q9UJ90 142 aa13.89□□□□□ -0.19
CBX3-202ENST00000396386 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 ZNF749O43361 778 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 KLF4O43474 513 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 CDC123O75794 336 aaPredicted RBP13.88□□□□□ -0.19
CBX3-202ENST00000396386 KCNK2O95069 426 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 NADKO95544 446 aaPredicted RBP13.88□□□□□ -0.19
CBX3-202ENST00000396386 RPLP0P05388 317 aaKnown RBP13.88□□□□□ -0.19
CBX3-202ENST00000396386 GUSBP08236 651 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 HSMCR30P0CW71 290 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 S1PR1P21453 382 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 MED22Q15528 200 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 SNAPC1Q16533 368 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 FLYWCH1Q4VC44 716 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 LINC00299Q6ZSB3 139 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 TMEM163Q8TC26 289 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 OSTF1Q92882 214 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 CLDN23Q96B33 292 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 ZHX1-C8orf76Q96EF9 292 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 MMABQ96EY8 250 aaPredicted RBP13.88□□□□□ -0.19
CBX3-202ENST00000396386 RBM18Q96H35 190 aaKnown RBP13.88□□□□□ -0.19
CBX3-202ENST00000396386 LRR1Q96L50 414 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 ZNF582Q96NG8 517 aaPredicted RBP13.88□□□□□ -0.19
CBX3-202ENST00000396386 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
CBX3-202ENST00000396386 ALOXE3Q9BYJ1 711 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 RNF215Q9Y6U7 377 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 NUP210LQ5VU65 1888 aa13.88□□□□□ -0.19
CBX3-202ENST00000396386 FITM1A5D6W6 292 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 STK25O00506 426 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 PRAMEF2O60811 474 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 PRG2P13727 222 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 GNSP15586 552 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 HTR2AP28223 471 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 RGS6P49758 472 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 EMDP50402 254 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 BMXP51813 675 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 RHAGQ02094 409 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 GRM7Q14831 915 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 NCF4Q15080 339 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 ZNF620Q6ZNG0 422 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 BCDIN3DQ7Z5W3 292 aaKnown RBP13.87□□□□□ -0.19
CBX3-202ENST00000396386 CYP4Z2PQ8N1L4 340 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 METTL27Q8N6F8 245 aaPredicted RBP13.87□□□□□ -0.19
CBX3-202ENST00000396386 POGLUT1Q8NBL1 392 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 DNASE2BQ8WZ79 361 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 AHCYL2Q96HN2 611 aaKnown RBP13.87□□□□□ -0.19
CBX3-202ENST00000396386 OR5M11Q96RB7 305 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 MGLLQ99685 303 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 PELOQ9BRX2 385 aaKnown RBP13.87□□□□□ -0.19
CBX3-202ENST00000396386 TEX12Q9BXU0 123 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 RACGAP1Q9H0H5 632 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 PALMDQ9NP74 551 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 NLGN3Q9NZ94 848 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 KLHL3Q9UH77 587 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 ERGIC3Q9Y282 383 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 H0YIG0 161 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 GKN3PP0CG01 181 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 SSTR4P31391 388 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 UGT2B10P36537 528 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 OPRL1P41146 370 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 RFX3P48380 749 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 RNF144AP50876 292 aaPredicted RBP13.87□□□□□ -0.19
CBX3-202ENST00000396386 AFF3P51826 1226 aaKnown RBP13.87□□□□□ -0.19
CBX3-202ENST00000396386 HSD17B7P56937 341 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 EFNB1P98172 346 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 PSG6Q00889 435 aa13.87□□□□□ -0.19
CBX3-202ENST00000396386 SRSF5Q13243 272 aaKnown RBP13.87□□□□□ -0.19
CBX3-202ENST00000396386 OR1Q1Q15612 314 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms