RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PGGHGQ32M88 737 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 TBC1D25Q3MII6 688 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 AADACL4Q5VUY2 407 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 CCDC190Q86UF4 302 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 LYSMD2Q8IV50 215 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 RNF113BQ8IZP6 322 aaKnown RBP15.62■□□□□ 0.09
NUP50-202ENST00000396096 COX18Q8N8Q8 333 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 FAM174AQ8TBP5 190 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 WSB2Q9NYS7 404 aaPredicted RBP15.62■□□□□ 0.09
NUP50-202ENST00000396096 CRNNQ9UBG3 495 aaPredicted RBP15.62■□□□□ 0.09
NUP50-202ENST00000396096 SLC7A7Q9UM01 511 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 CYP8B1Q9UNU6 501 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 SCN2AQ99250 2005 aa15.62■□□□□ 0.09
NUP50-202ENST00000396096 PNMA8CA0A1B0GUJ8 204 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 CDHR4A6H8M9 788 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 PIP5K1CO60331 668 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 LYPD3O95274 346 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 MED26O95402 600 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 SLC35E2P0CK97 266 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 BLKP51451 505 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 PPP1CAP62136 330 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 HHEXQ03014 270 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 CDC20Q12834 499 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 ZNF542PQ5EBM4 170 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 SHISA5Q8N114 240 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 PARP16Q8N5Y8 322 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 FLCNQ8NFG4 579 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 RFKQ969G6 155 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 CCDC3Q9BQI4 270 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 ORAI3Q9BRQ5 295 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 CNPPD1Q9BV87 410 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 SP140LQ9H930 580 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 CHCHD3Q9NX63 227 aaKnown RBP15.61■□□□□ 0.09
NUP50-202ENST00000396096 QPCTLQ9NXS2 382 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 KLHL3Q9UH77 587 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 KCNE5Q9UJ90 142 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 ZNF223Q9UK11 482 aaPredicted RBP15.61■□□□□ 0.09
NUP50-202ENST00000396096 SSR3Q9UNL2 185 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 GPR52Q9Y2T5 361 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 MTCH2Q9Y6C9 303 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 BRINP1O60477 761 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 NKX2-2O95096 273 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 SNX4O95219 450 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 CT62P0C5K7 136 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 CTSEP14091 401 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 HTR2AP28223 471 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 GPR4P46093 362 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 POU6F2P78424 691 aaPredicted RBP15.61■□□□□ 0.09
NUP50-202ENST00000396096 TPBGQ13641 420 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 FLYWCH1Q4VC44 716 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 MRPL2Q5T653 305 aaKnown RBP15.61■□□□□ 0.09
NUP50-202ENST00000396096 ARMC6Q6NXE6 501 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 BRIX1Q8TDN6 353 aaKnown RBP15.61■□□□□ 0.09
NUP50-202ENST00000396096 ZDHHC1Q8WTX9 485 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 PIK3R3Q92569 461 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 NEURL2Q9BR09 285 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 NUAK2Q9H093 628 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 EXOSC4Q9NPD3 245 aaKnown RBP15.61■□□□□ 0.09
NUP50-202ENST00000396096 FBXL21Q9UKT6 434 aa15.61■□□□□ 0.09
NUP50-202ENST00000396096 BRWD1Q9NSI6 2320 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 TMEM131Q92545 1883 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 A0A1W2PPC4 97 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 HCRTR1O43613 425 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 HMGN1P05114 100 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 ST6GAL1P15907 406 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 RPS19P39019 145 aaKnown RBP15.6■□□□□ 0.09
NUP50-202ENST00000396096 CD97P48960 835 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 CLEC12AQ5QGZ9 265 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 AGAP7PQ5VUJ5 663 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 LIPKQ5VXJ0 399 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 SLC30A6Q6NXT4 461 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 Q6ZS52 159 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 PARGQ86W56 976 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 GALNT12Q8IXK2 581 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 FRMD1Q8N878 549 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 ZNF485Q8NCK3 441 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 GPR151Q8TDV0 419 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 TRMT61AQ96FX7 289 aaKnown RBP15.6■□□□□ 0.09
NUP50-202ENST00000396096 GPR174Q9BXC1 333 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 ZNF576Q9H609 170 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 FAM60AQ9NP50 221 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 FBXO34Q9NWN3 711 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 DOLKQ9UPQ8 538 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 EXOGQ9Y2C4 368 aaKnown RBP15.6■□□□□ 0.09
NUP50-202ENST00000396096 CARD8Q9Y2G2 431 aa15.6■□□□□ 0.09
NUP50-202ENST00000396096 SGK494L7N484 410 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 COQ9O75208 318 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 CBX7O95931 251 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 LIMS3P0CW19 117 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 LIMS4P0CW20 117 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 PRG2P13727 222 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 CDH11P55287 796 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 EXOSC7Q15024 291 aaKnown RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 OR1Q1Q15612 314 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 PRTGQ2VWP7 1150 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 ZNF438Q7Z4V0 828 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 SLC22A16Q86VW1 577 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 C19orf47Q8N9M1 422 aaKnown RBP15.59■□□□□ 0.09
NUP50-202ENST00000396096 OR2T33Q8NG76 320 aa15.59■□□□□ 0.09
NUP50-202ENST00000396096 KLHDC7BQ96G42 594 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms