RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 ZNF845Q96IR2 970 aaPredicted RBP16.25■□□□□ 0.19
CXCL12-204ENST00000395793 FAM111AQ96PZ2 611 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 NPAS1Q99742 590 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 SDHAF3Q9NRP4 125 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 FBXO34Q9NWN3 711 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 NTMQ9P121 344 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 NUP214P35658 2090 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-204ENST00000395793 PIP5K1BO14986 540 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 KCNH1O95259 989 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 BCKDHAP12694 445 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 CCKARP32238 428 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 GPC1P35052 558 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 CPOXP36551 454 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 KIR2DL2P43627 348 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-204ENST00000395793 PRKAG1P54619 331 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 PSMD4P55036 377 aaKnown RBP16.24■□□□□ 0.19
CXCL12-204ENST00000395793 SIRPAP78324 504 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 DUSP5Q16690 384 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 ARL13AQ5H913 290 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-204ENST00000395793 ZNF474Q6S9Z5 364 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-204ENST00000395793 ZCCHC23Q6ZST2 131 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 P4HA3Q7Z4N8 544 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 BTLAQ7Z6A9 289 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 GGNQ86UU5 652 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 SLC16A11Q8NCK7 471 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 OR4C3Q8NH37 302 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 SMPDL3BQ92485 455 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 SLC9A6Q92581 669 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 C16orf58Q96GQ5 468 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 DACH2Q96NX9 599 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 YIPF4Q9BSR8 244 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 PINK1Q9BXM7 581 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 TBL1XR1Q9BZK7 514 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 OPN3Q9H1Y3 402 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-204ENST00000395793 PTGES2Q9H7Z7 377 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 C3orf14Q9HBI5 128 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 SIRT3Q9NTG7 399 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-204ENST00000395793 SH3BP4Q9P0V3 963 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 MRTO4Q9UKD2 239 aaKnown RBP16.24■□□□□ 0.19
CXCL12-204ENST00000395793 TESMINQ9Y4I5 508 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 ZFHX3Q15911 3703 aa16.24■□□□□ 0.19
CXCL12-204ENST00000395793 FLNAP21333 2647 aaKnown RBP16.23■□□□□ 0.19
CXCL12-204ENST00000395793 TTC36A6NLP5 189 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 MSTNO14793 375 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 SIAH2O43255 324 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 NPHS1O60500 1241 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 DIAPH2O60879 1101 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 SPAG7O75391 227 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 SMNDC1O75940 238 aaKnown RBP eCLIP16.23■□□□□ 0.19
CXCL12-204ENST00000395793 OXSR1O95747 527 aaPredicted RBP16.23■□□□□ 0.19
CXCL12-204ENST00000395793 CRHP06850 196 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 FGF4P08620 206 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 CD99P14209 185 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 MANFP55145 182 aaKnown RBP16.23■□□□□ 0.19
CXCL12-204ENST00000395793 VSNL1P62760 191 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 FAM27E3Q08E93 113 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 XKR7Q5GH72 579 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 FBXW10Q5XX13 1052 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 MFSD12Q6NUT3 480 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 FIGNL1Q6PIW4 674 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 SZRD1Q7Z422 152 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 DDIASQ8IXT1 998 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 CNEP1R1Q8N9A8 125 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 CDRT4Q8N9R6 151 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 GATSQ8NAP1 163 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 ZFP28Q8NHY6 868 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 FNDC9Q8TBE3 224 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 FAM110BQ8TC76 370 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 AGR3Q8TD06 166 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 NUDT8Q8WV74 236 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 MBD6Q96DN6 1003 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 ZBED6CLQ96FA7 236 aaPredicted RBP16.23■□□□□ 0.19
CXCL12-204ENST00000395793 MS4A4EQ96PG1 132 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 ALPK1Q96QP1 1244 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 RNF122Q9H9V4 155 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 ACSS1Q9NUB1 689 aaPredicted RBP16.23■□□□□ 0.19
CXCL12-204ENST00000395793 LGALS13Q9UHV8 139 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 VDAC3Q9Y277 283 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 TRAF6Q9Y4K3 522 aa16.23■□□□□ 0.19
CXCL12-204ENST00000395793 ALG1L2C9J202 215 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 EMC8O43402 210 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 TNFRSF21O75509 655 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 KCNK2O95069 426 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 CHEK2O96017 543 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 CGAP01215 116 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 RAF1P04049 648 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 NUDT17P0C025 328 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 CREB1P16220 341 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 KLK2P20151 261 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 CLK3P49761 638 aaKnown RBP16.22■□□□□ 0.19
CXCL12-204ENST00000395793 DIO3P55073 304 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 C17orf67Q0P5P2 114 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 FOXD4Q12950 439 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-204ENST00000395793 PON3Q15166 354 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 GUSBP1Q15486 140 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 GLYR1Q49A26 553 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-204ENST00000395793 OR2A2Q6IF42 318 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 CHMP1BQ7LBR1 199 aa16.22■□□□□ 0.19
CXCL12-204ENST00000395793 RIBC1Q8N443 379 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-204ENST00000395793 METTL25Q8N6Q8 603 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms