RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CSNK1G3Q9Y6M4 447 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 CEP250Q9BV73 2442 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 RP1P56715 2156 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 ARID1BQ8NFD5 2236 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-203ENST00000394269 EFCAB10A6NFE3 127 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 SLC2A10O95528 541 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 CALRP27797 417 aaKnown RBP10.36□□□□□ -0.75
TCOF1-203ENST00000394269 SOX18P35713 384 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 SERPINB10P48595 397 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 PCYT1AP49585 367 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 POU6F2P78424 691 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-203ENST00000394269 SMAD2Q15796 467 aaKnown RBP10.36□□□□□ -0.75
TCOF1-203ENST00000394269 NDUFAF6Q330K2 333 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 PLAG1Q6DJT9 500 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 SHISA6Q6ZSJ9 500 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 KIF18BQ86Y91 864 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 CDRT4Q8N9R6 151 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-203ENST00000394269 ZFPM2Q8WW38 1151 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 ANKRD9Q96BM1 317 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-203ENST00000394269 YIPF6Q96EC8 236 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 ART5Q96L15 291 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 CENPOQ9BU64 300 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 PIGUQ9H490 435 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 LYRM4Q9HD34 91 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 PRTFDC1Q9NRG1 225 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 PTGFRNQ9P2B2 879 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 KCNE5Q9UJ90 142 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 ERVK-19Q9WJR5 959 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 DTX4Q9Y2E6 619 aa10.36□□□□□ -0.75
TCOF1-203ENST00000394269 ASPMQ8IZT6 3477 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 A0A1B0GVT2 93 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 CLDN4O14493 209 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 SERPINI2O75830 405 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 GABARAPO95166 117 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 IFNGR2P38484 337 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 CCR4P51679 360 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 RACK1P63244 317 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 BNC1Q01954 994 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 MXD1Q05195 221 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 ZNF91Q05481 1191 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 ZNHIT3Q15649 155 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 PRICKLE4Q2TBC4 344 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 LRIT3Q3SXY7 679 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 C1orf189Q5VU69 101 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 FAAH2Q6GMR7 532 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 SLC27A4Q6P1M0 643 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 RNF44Q7L0R7 432 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 LHFPL3Q86UP9 236 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 ALDH16A1Q8IZ83 802 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 PFN4Q8NHR9 129 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 MAFAQ8NHW3 353 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 CNDP2Q96KP4 475 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 POLR2J2Q9GZM3 115 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 PDE7BQ9NP56 450 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 FSCN3Q9NQT6 498 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 TOR4AQ9NXH8 423 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 IFT52Q9Y366 437 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 SLC22A1O15245 554 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 LRRTM2O43300 516 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 MPZL2O60487 215 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 RNH1P13489 461 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 NME1P15531 152 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 SMSP52788 366 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 HNRNPKP61978 463 aaKnown RBP eCLIP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 MOGQ16653 247 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 SLX4IPQ5VYV7 408 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 ZFP41Q8N8Y5 198 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 MCFD2Q8NI22 146 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 CNOT9Q92600 299 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 SAMD8Q96LT4 415 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 DGAT2Q96PD7 388 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 SMAD5Q99717 465 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 ACAD8Q9UKU7 415 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 TMEM184BQ9Y519 407 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 SPTA1P02549 2419 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 AGAP5A6NIR3 686 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 MYL12BO14950 172 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 ASNA1O43681 348 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 THY1P04216 161 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 IFI30P13284 250 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 CAPZBP47756 277 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 RGS6P49758 472 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 ARFIP1P53367 373 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 RAB38P57729 211 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 DMWDQ09019 674 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 CEBPEQ15744 281 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 ARHGAP11BQ3KRB8 267 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 KLHL12Q53G59 568 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 LIPKQ5VXJ0 399 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 RANBP3LQ86VV4 465 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 OR8D4Q8NGM9 314 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 DIO2Q92813 273 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 TBX5Q99593 518 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 OR8D2Q9GZM6 311 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 TBC1D17Q9HA65 648 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 CHCHD3Q9NX63 227 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 GALNT8Q9NY28 637 aa10.35□□□□□ -0.75
TCOF1-203ENST00000394269 MRPS33Q9Y291 106 aaKnown RBP10.35□□□□□ -0.75
TCOF1-203ENST00000394269 RPL36Q9Y3U8 105 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms