RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 OR2L13Q8N349 312 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 OR10D3Q8NH80 312 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 RAB3IL1Q8TBN0 382 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 DUSP19Q8WTR2 217 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 ZNF382Q96SR6 550 aa13.74□□□□□ -0.21
CHMP3-202ENST00000393773 PLCE1Q9P212 2302 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 RNF212BA8MTL3 300 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 UPK1AO00322 258 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 SLITRK5O94991 958 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 UTS2O95399 124 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 ANGPTL1O95841 491 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 PLGP00747 810 aaPredicted RBP13.73□□□□□ -0.21
CHMP3-202ENST00000393773 IGKV1D-16P01601 117 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 JUNP05412 331 aaKnown RBP13.73□□□□□ -0.21
CHMP3-202ENST00000393773 THBS1P07996 1170 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 SOD3P08294 240 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 DANCRP0C864 163 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 DDCP20711 480 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 AGTR1P30556 359 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 MPIP34949 423 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 PHBP35232 272 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 GSTM5P46439 218 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 CTBP2P56545 445 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 PRR5P85299 388 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 ACSM2AQ08AH3 577 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 ACSM2BQ68CK6 577 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 DNM1P46Q6ZS02 220 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 BEND4Q6ZU67 534 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 GALNT10Q86SR1 603 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 TMEM237Q96Q45 408 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 BBS4Q96RK4 519 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 PAFAH2Q99487 392 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 LMF2Q9BU23 707 aaKnown RBP13.73□□□□□ -0.21
CHMP3-202ENST00000393773 REG4Q9BYZ8 158 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 Q9N2J8 555 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 DMGDHQ9UI17 866 aaKnown RBP13.73□□□□□ -0.21
CHMP3-202ENST00000393773 VDAC3Q9Y277 283 aa13.73□□□□□ -0.21
CHMP3-202ENST00000393773 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 CD5LO43866 347 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 GMFGO60234 142 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 PSMA4P25789 261 aaKnown RBP13.72□□□□□ -0.21
CHMP3-202ENST00000393773 NCBP2P52298 156 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHMP3-202ENST00000393773 ZNF763Q0D2J5 394 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 C17orf67Q0P5P2 114 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 GRAMD1BQ3KR37 738 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 UNC50Q53HI1 259 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 ZNF678Q5SXM1 525 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 HMBOX1Q6NT76 420 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 SEZ6L2Q6UXD5 910 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 GPRIN3Q6ZVF9 776 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 GTPBP8Q8N3Z3 284 aaPredicted RBP13.72□□□□□ -0.21
CHMP3-202ENST00000393773 S100PBPQ96BU1 408 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 PRRG4Q9BZD6 226 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 TBL1XR1Q9BZK7 514 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 DDX18Q9NVP1 670 aaKnown RBP13.72□□□□□ -0.21
CHMP3-202ENST00000393773 SIRT5Q9NXA8 310 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 MCTS1Q9ULC4 181 aaKnown RBP13.72□□□□□ -0.21
CHMP3-202ENST00000393773 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 GPR52Q9Y2T5 361 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 RNF115Q9Y4L5 304 aa13.72□□□□□ -0.21
CHMP3-202ENST00000393773 MAGED1Q9Y5V3 778 aaPredicted RBP13.72□□□□□ -0.21
CHMP3-202ENST00000393773 GXYLT2A0PJZ3 443 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 C7orf72A4D263 438 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 ADAMDEC1O15204 470 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 CXCL13O43927 109 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 ULK1O75385 1050 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 GCM2O75603 506 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-202ENST00000393773 IGHV4-39P01824 125 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 TUBBP07437 444 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 INHBAP08476 426 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 HMOX2P30519 316 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 CDKN1AP38936 164 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 RFX3P48380 749 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 CLK3P49761 638 aaKnown RBP13.71□□□□□ -0.21
CHMP3-202ENST00000393773 SERPINB9P50453 376 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 PLPPR5Q32ZL2 321 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 ZNF572Q7Z3I7 529 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-202ENST00000393773 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHMP3-202ENST00000393773 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 HOXB13Q92826 284 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-202ENST00000393773 FBXW5Q969U6 566 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 AMDHD1Q96NU7 426 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 SLCO5A1Q9H2Y9 848 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 CDC42EP4Q9H3Q1 356 aaKnown RBP13.71□□□□□ -0.21
CHMP3-202ENST00000393773 GLIPR2Q9H4G4 154 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 C12orf49Q9H741 205 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 FANCFQ9NPI8 374 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 GLRX2Q9NS18 164 aa13.71□□□□□ -0.21
CHMP3-202ENST00000393773 PAQR5Q9NXK6 330 aaPredicted RBP13.71□□□□□ -0.21
CHMP3-202ENST00000393773 TRIM49D1C9J1S8 452 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 TNFSF11O14788 317 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 TLX2O43763 284 aaPredicted RBP13.7□□□□□ -0.22
CHMP3-202ENST00000393773 SUPT7LO94864 414 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 ANXA4P09525 319 aaPredicted RBP13.7□□□□□ -0.22
CHMP3-202ENST00000393773 IFI6P09912 130 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 ACVR1BP36896 505 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 PSMD4P55036 377 aaKnown RBP13.7□□□□□ -0.22
CHMP3-202ENST00000393773 NCMAPQ5T1S8 102 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 FAM71E1Q6IPT2 247 aa13.7□□□□□ -0.22
CHMP3-202ENST00000393773 MFSD12Q6NUT3 480 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms