RNA–Protein interactions for RNA: ENST00000390980.1

RNU6-578P-201, Transcript of RNA, U6 small nuclear 578, pseudogene, humanhuman

BASIC

Gene RNU6-578P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-578P-201ENST00000390980 PELI1Q96FA3 418 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 FER1L6-AS2Q96M78 137 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 NPAS2Q99743 824 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 RASL11BQ9BPW5 248 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 APOOQ9BUR5 198 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 CHCHD3Q9NX63 227 aaKnown RBP0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 MTRF1LQ9UGC7 380 aaKnown RBP0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 ANGPTL2Q9UKU9 493 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 UBQLN1Q9UMX0 589 aaKnown RBP0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 EXOC7Q9UPT5 735 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 SHROOM3Q8TF72 1996 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 IGSF9BQ9UPX0 1349 aa0.33□□□□□ -2.36
RNU6-578P-201ENST00000390980 HELZ2Q9BYK8 2649 aaKnown RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 SMIM28A0A1B0GU29 152 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 C7orf66A4D0T2 115 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 FAM149AA5PLN7 773 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 SDR42E2A6NKP2 422 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 A8MXE2 369 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 ST8SIA3O43173 380 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 OR10H3O60404 316 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 SDC3O75056 442 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 RAD51DO75771 328 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 IGSF6O95976 241 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 CHRNA1P02708 482 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 RLN1P04808 185 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 CD55P08174 381 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 CRISP2P16562 243 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 LGALS3P17931 250 aaKnown RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 KIR2DS2P43631 304 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 STK19P49842 368 aaPredicted RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 NPY4RP50391 375 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 SH3BGRP55822 239 aaPredicted RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 MEF2CQ06413 473 aaPredicted RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 ARHGAP1Q07960 439 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 KLHL30Q0D2K2 578 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 NFE2L1Q14494 772 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 TWISTNBQ3B726 338 aaPredicted RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 COX19Q49B96 90 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 CDC42EP5Q6NZY7 148 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 KIF18AQ8NI77 898 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 DNASE1L2Q92874 299 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 VPS33AQ96AX1 596 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 MRPL53Q96EL3 112 aaKnown RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 TMEM80Q96HE8 168 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 INTS14Q96SY0 518 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 FUNDC2Q9BWH2 189 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 TEX13AQ9BXU3 409 aaPredicted RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 ACPTQ9BZG2 426 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 GPR61Q9BZJ8 451 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 IFI27L2Q9H2X8 130 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 DDX28Q9NUL7 540 aaKnown RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 GIMAP2Q9UG22 337 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 DCDC2Q9UHG0 476 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 KCNK6Q9Y257 313 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 WDR45Q9Y484 360 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 CCL27Q9Y4X3 112 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 DOCK9Q9BZ29 2069 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 SHANK1Q9Y566 2161 aa0.32□□□□□ -2.36
RNU6-578P-201ENST00000390980 COL11A1P12107 1806 aaPredicted RBP0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 KMT2BQ9UMN6 2715 aaPredicted RBP0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 NPIPA2E9PIF3 369 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 UBE2CO00762 179 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 ATP9AO75110 1047 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 KIAA0754O94854 1291 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 SLITRK3O94933 977 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 MOSP00540 346 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 CHRNGP07510 517 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 HMGB1P09429 215 aaKnown RBP0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 CCNA2P20248 432 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 COX7A1P24310 79 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 PTAFRP25105 342 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 GCKP35557 465 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 PRKCIP41743 596 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 MAGEB1P43366 347 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 ACADSBP45954 432 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 CAPZA1P52907 286 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 SLC39A6Q13433 755 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 ARFRP1Q13795 201 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 EXOSC7Q15024 291 aaKnown RBP0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 RAB35Q15286 201 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 TCP11X2Q5H9J9 407 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 HYIQ5T013 277 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 CASC10Q5T4H9 136 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 NCR3LG1Q68D85 454 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 CLEC4GQ6UXB4 293 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 MSANTD1Q6ZTZ1 278 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 GDPD3Q7L5L3 318 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 SPATA19Q7Z5L4 167 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 ASPGQ86U10 573 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 KLHDC8AQ8IYD2 350 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 SIDT2Q8NBJ9 832 aaKnown RBP0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 GLYATL1Q969I3 302 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 FOXC2Q99958 501 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 NRIP2Q9BQI9 281 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 FERMT1Q9BQL6 677 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 NTMT1Q9BV86 223 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 CARD6Q9BX69 1037 aa0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 POLR2J2Q9GZM3 115 aaKnown RBP0.31□□□□□ -2.36
RNU6-578P-201ENST00000390980 POLR2J3Q9H1A7 115 aaKnown RBP0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms