RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 IL2RGP31785 369 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 RPL4P36578 427 aaKnown RBP1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 RABIFP47224 123 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 DHPSP49366 369 aaPredicted RBP1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 GMFBP60983 142 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 OSTNP61366 133 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 IL1RL1Q01638 556 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 PLOD1Q02809 727 aaPredicted RBP1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 ZNF154Q13106 437 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 EXOSC2Q13868 293 aaKnown RBP1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 DPYSQ14117 519 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 PRR4Q16378 134 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 ADPRMQ3LIE5 342 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 DCAF4L1Q3SXM0 396 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 PARP10Q53GL7 1025 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 TEX44Q53QW1 395 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 LDLRAP1Q5SW96 308 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 METTL11BQ5VVY1 283 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 OR5M10Q6IEU7 315 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 SCYL2Q6P3W7 929 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 SLC39A4Q6P5W5 647 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 CYS1Q717R9 158 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 CENPUQ71F23 418 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 SYVN1Q86TM6 617 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 IFNEQ86WN2 208 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 ZNF677Q86XU0 584 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 CBWD2Q8IUF1 395 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 FBXO16Q8IX29 292 aaPredicted RBP1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 CERS5Q8N5B7 392 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 ZSCAN4Q8NAM6 433 aaPredicted RBP1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 C18orf25Q96B23 403 aaPredicted RBP1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 SLC25A38Q96DW6 304 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 VSTM2LQ96N03 204 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 TBCDQ9BTW9 1192 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 FICDQ9BVA6 458 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 C19orf24Q9BVV8 132 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 TM2D1Q9BX74 207 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 TBC1D10AQ9BXI6 508 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 NFKBIZQ9BYH8 718 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 COG4Q9H9E3 785 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 NGBQ9NPG2 151 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 YAE1D1Q9NRH1 226 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 C1orf123Q9NWV4 160 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 TMEM9Q9P0T7 183 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 ANKMY1Q9P2S6 941 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 SLC2A6Q9UGQ3 507 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 ATP6V1HQ9UI12 483 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 CRLS1Q9UJA2 301 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 ODF2LQ9ULJ1 636 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 SAMD4AQ9UPU9 718 aaKnown RBP1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 MGAT4BQ9UQ53 548 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 CHMP2BQ9UQN3 213 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 RNF6Q9Y252 685 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 CA5BQ9Y2D0 317 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 FLVCR1Q9Y5Y0 555 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 CLCA3PQ9Y6N3 262 aa1.2□□□□□ -2.22
RNU6-440P-201ENST00000390882 SAGE2PA6NJ88 616 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 ZSCAN5BA6NJL1 495 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 ZFP92A6NM28 416 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 DHRS7CA6NNS2 312 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 TMEM110-MUSTN1A8MSY1 372 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 CDX4O14627 284 aaPredicted RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 HDAC3O15379 428 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 LATO43561 262 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 VPS26AO75436 327 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 SCRG1O75711 98 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 PTBP3O95758 552 aaKnown RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 CHRNA1P02708 482 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 HSPB1P04792 205 aaKnown RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 CA3P07451 260 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 HBQ1P09105 142 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 DUX4L4P0CJ87 422 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 CCDC166P0CW27 439 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 THRBP10828 461 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 CLUP10909 449 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 CD1EP15812 388 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 XRCC1P18887 633 aaPredicted RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 PSMB1P20618 241 aaKnown RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 PTBP1P26599 531 aaKnown RBP eCLIP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 UGT1A3P35503 534 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 CYLC1P35663 651 aaPredicted RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 PTGFRP43088 359 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 GNPDA1P46926 289 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 SLC26A2P50443 739 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 NOVA1P51513 510 aaKnown RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 NAPAP54920 295 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 DIO3P55073 304 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 MTTPP55157 894 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 STX17P56962 302 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 RIPPLY3P57055 190 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 RND3P61587 244 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 NTHL1P78549 312 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 MRPS11P82912 194 aaKnown RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 VLDLRP98155 873 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 HSF2Q03933 536 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 PDZK1IP1Q13113 114 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 DPYSL3Q14195 570 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 RFTN1Q14699 578 aaPredicted RBP1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 TRIP10Q15642 601 aa1.19□□□□□ -2.22
RNU6-440P-201ENST00000390882 CEBPEQ15744 281 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms