RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SAMSN1Q9NSI8 373 aaKnown RBP0.14□□□□□ -2.39
SNORD28-201ENST00000384706 PIGVQ9NUD9 493 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 SOHLH2Q9NX45 425 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 C6orf203Q9P0P8 240 aaPredicted RBP0.14□□□□□ -2.39
SNORD28-201ENST00000384706 VPS18Q9P253 973 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 LHX3Q9UBR4 397 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 MTRF1LQ9UGC7 380 aaKnown RBP0.14□□□□□ -2.39
SNORD28-201ENST00000384706 SWAP70Q9UH65 585 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 ZNF391Q9UJN7 358 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 DIMT1Q9UNQ2 313 aaKnown RBP0.14□□□□□ -2.39
SNORD28-201ENST00000384706 EXOC7Q9UPT5 735 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 L3MBTL1Q9Y468 752 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 WDR45Q9Y484 360 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.14□□□□□ -2.39
SNORD28-201ENST00000384706 TUBGCP6Q96RT7 1819 aa0.14□□□□□ -2.39
SNORD28-201ENST00000384706 MUC5ACP98088 5654 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 IGSF9BQ9UPX0 1349 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 YEATS2Q9ULM3 1422 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 HELZ2Q9BYK8 2649 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 IGLV1-50A0A075B6I6 118 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 IGHV1OR15-1A0A075B7D0 117 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 A0A087X0K7 114 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SDR42E2A6NKP2 422 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 J3QRE1 110 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 K7EM74 188 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 K7ENP7 123 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PDLIM1O00151 329 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SULT2B1O00204 365 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 MSH4O15457 936 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 RRP8O43159 456 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 TPD52L2O43399 206 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 AHCYL1O43865 530 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 HCN1O60741 890 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 ATP9AO75110 1047 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 ENTPD5O75356 428 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GMNNO75496 209 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 AKR7A3O95154 331 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SNAPINO95295 136 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 IGSF6O95976 241 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GAS8O95995 478 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 MOSP00540 346 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SLC4A1P02730 911 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 RLN1P04808 185 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GSTA1P08263 222 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 IGFBP1P08833 259 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CCDC175P0C221 793 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CISD3P0C7P0 127 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PNMA6AP0CW24 399 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CT45A8P0DMV1 189 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CT45A9P0DMV2 189 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GLULP15104 373 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CCNA2P20248 432 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CCND3P30281 292 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 TIA1P31483 386 aaKnown RBP eCLIP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 STIP1P31948 543 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SOAT1P35610 550 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 NMUP48645 174 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 STK19P49842 368 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 EFNB2P52799 333 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CAPZA1P52907 286 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PPP5CP53041 499 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CRISP3P54108 245 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 RPS6P62753 249 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 NPRL3Q12980 569 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SLC39A6Q13433 755 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 GRB7Q14451 532 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 STK11Q15831 433 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 TWISTNBQ3B726 338 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 TEX44Q53QW1 395 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CT45A2Q5DJT8 189 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 LIPKQ5VXJ0 399 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 MZT2BQ6NZ67 158 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CDC42EP5Q6NZY7 148 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PODNL1Q6PEZ8 512 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 WDR74Q6RFH5 385 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CLEC4GQ6UXB4 293 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 ERN2Q76MJ5 926 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 COX15Q7KZN9 410 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PRPF39Q86UA1 669 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 NAA40Q86UY6 237 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 AQP12AQ8IXF9 295 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 C12orf56Q8IXR9 622 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 SMC5Q8IY18 1101 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 PNKDQ8N490 385 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 Q8N976 141 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 OR2T33Q8NG76 320 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 OR6M1Q8NGM8 313 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 ZNF461Q8TAF7 563 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 RDH11Q8TC12 318 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 DNAJA4Q8WW22 397 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 OR1E3Q8WZA6 343 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 HAS2Q92819 552 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 DLX4Q92988 240 aaPredicted RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 FAM46BQ96A09 425 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 VPS33AQ96AX1 596 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 MRPL53Q96EL3 112 aaKnown RBP0.13□□□□□ -2.39
SNORD28-201ENST00000384706 C5orf30Q96GV9 206 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 CDKN2AIPNLQ96HQ2 116 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 NRIP2Q9BQI9 281 aa0.13□□□□□ -2.39
SNORD28-201ENST00000384706 NTMT1Q9BV86 223 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms