RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ETV1P50549 477 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 GAS1P54826 345 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 VSX2P58304 361 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 SHC2P98077 582 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 RHAGQ02094 409 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 EXOSC7Q15024 291 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TRAM2Q15035 370 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 SPHARQ15513 63 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 DEFB110Q30KQ9 67 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 DESI1Q6ICB0 168 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 ZNF836Q6ZNA1 936 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 ABHD13Q7L211 337 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 GDF7Q7Z4P5 450 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 NANOGP1Q8N7R0 232 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 RSC1A1Q92681 617 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TOE1Q96GM8 510 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 MCHR1Q99705 422 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 MROQ9BYG7 248 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 NXF2Q9GZY0 626 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 MMP27Q9H306 513 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 C8orf33Q9H7E9 229 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 CALML5Q9NZT1 146 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 USP36Q9P275 1121 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 KCNE5Q9UJ90 142 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 NOSIPQ9Y314 301 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 A0A0C4DFX4 3053 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 PCDH15Q96QU1 1955 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 DUXAA6NLW8 204 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 C2orf74A8MZ97 194 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 CYR61O00622 381 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 LRRTM2O43300 516 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 GKN3PP0CG01 181 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TLX1P31314 330 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TSPAN7P41732 249 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 DBPQ10586 325 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 ST3GAL3Q11203 375 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 FZD2Q14332 565 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 NDUFA9Q16795 377 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TRIM16LQ309B1 348 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 ARHGAP11BQ3KRB8 267 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 MEDAGQ5VYS4 303 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 DGAT2L6Q6ZPD8 337 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 PLEKHM3Q6ZWE6 761 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 SHFQ7M4L6 423 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TAF8Q7Z7C8 310 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 ZNF554Q86TJ5 538 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 NRMQ8IXM6 262 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 LINC00471Q8N535 108 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 SUN5Q8TC36 379 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 RERGQ96A58 199 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 MTHFD2LQ9H903 347 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 IL21RQ9HBE5 538 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 TESQ9UGI8 421 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 PRELID1Q9Y255 219 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 THADAQ6YHU6 1953 aa7.42□□□□□ -1.22
PDLIM5-204ENST00000380176 SPTY2D1-AS1A0A0U1RR47 76 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 URADA6NGE7 173 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 PRAMEF26H0Y7S4 382 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 SGK494L7N484 410 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 PEX12O00623 359 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 THEGLP0DJG4 465 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 GNSP15586 552 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 CD40LGP29965 261 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 RABIFP47224 123 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 BCAP31P51572 246 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 ZNF136P52737 540 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 SMSP52788 366 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 PPP5CP53041 499 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 EEF1A1P68104 462 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 TSPAN31Q12999 210 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 SLC30A6Q6NXT4 461 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 SLC27A4Q6P1M0 643 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 RNF44Q7L0R7 432 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 GALNT12Q8IXK2 581 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 AMER2Q8N7J2 671 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 KBTBD8Q8NFY9 601 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 OR4Q3Q8NH05 313 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 GNPDA2Q8TDQ7 276 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 RLN3Q8WXF3 142 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 SLC41A3Q96GZ6 507 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 CNPPD1Q9BV87 410 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 GPR174Q9BXC1 333 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 POLR2J2Q9GZM3 115 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 POT1Q9NUX5 634 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 PTGFRNQ9P2B2 879 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 SLC7A7Q9UM01 511 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 C19orf53Q9UNZ5 99 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 A0A0J9YY10 115 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 AGAP5A6NIR3 686 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 CDC42EP2O14613 210 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 AP3D1O14617 1153 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 GALR3O60755 368 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 UBXN7O94888 489 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 ST6GAL1P15907 406 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 FUT1P19526 365 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 BTF3P20290 206 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 GSTM3P21266 225 aa7.41□□□□□ -1.22
PDLIM5-204ENST00000380176 NT5EP21589 574 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms