RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NKX2-2O95096 273 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 NADKO95544 446 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 PTHP01270 115 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 PROS1P07225 676 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 DBTP11182 482 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 NID1P14543 1247 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TYRP1P17643 537 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SOX18P35713 384 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 OMPP47874 163 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 RGS6P49758 472 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF91Q05481 1191 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 MGAT2Q10469 447 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 BIKQ13323 160 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 FAM53BQ14153 422 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SYT16Q17RD7 645 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF528Q3MIS6 628 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 KLHL22Q53GT1 634 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 C16orf87Q6PH81 154 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 C19orf48Q6RUI8 117 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC36A4Q6YBV0 504 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 MBOAT2Q6ZWT7 520 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 GDF7Q7Z4P5 450 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 HMGN2P46Q86SG4 172 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 C17orf82Q86X59 251 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF595Q8IYB9 648 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 RNF113BQ8IZP6 322 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ARL14Q8N4G2 192 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TMEM52Q8NDY8 209 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 OR6C4Q8NGE1 309 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 OR5T3Q8NGG3 340 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 WDR36Q8NI36 951 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 NDNFQ8TB73 568 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TMEM163Q8TC26 289 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 OSTF1Q92882 214 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ANKRD9Q96BM1 317 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SH3YL1Q96HL8 342 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 PLEKHA8Q96JA3 519 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF578Q96N58 590 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF285Q96NJ3 590 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 DACH2Q96NX9 599 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 LMF2Q9BU23 707 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TSSK6Q9BXA6 273 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TPSD1Q9BZJ3 242 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 DCSTAMPQ9H295 470 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 OCEL1Q9H607 264 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 FAM60AQ9NP50 221 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 MRPS18AQ9NVS2 196 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 CCDC59Q9P031 241 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TESQ9UGI8 421 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC6A14Q9UN76 642 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 DIMT1Q9UNQ2 313 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 GPR55Q9Y2T6 319 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 PCDHGA3Q9Y5H0 932 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TRAPPC13A5PLN9 417 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC9B1P1A6NJY1 282 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 SGK494L7N484 410 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 CCRL2O00421 344 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 OR10H2O60403 315 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 BRINP1O60477 761 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 NSA2O95478 260 aaKnown RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 RAB36O95755 333 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 IGFBP1P08833 259 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 SDHBP21912 280 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 GADD45AP24522 165 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 TRHRP34981 398 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 EPHA4P54764 986 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 MAZP56270 477 aaKnown RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 PPP1CAP62136 330 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 NCS1P62166 190 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 LSM3P62310 102 aaKnown RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 IGLV3-21P80748 117 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 EFNB1P98172 346 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 SPEM2Q0P670 501 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF155Q12901 538 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 C1DQ13901 141 aaKnown RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 UBXN2BQ14CS0 331 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNHIT3Q15649 155 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 GPR68Q15743 365 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 TCTE1Q5JU00 501 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 GDPGP1Q6ZNW5 385 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 PRICKLE2Q7Z3G6 844 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 WDR53Q7Z5U6 358 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF761Q86XN6 746 aaPredicted RBP9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 KIF18BQ86Y91 864 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 SFTPA2Q8IWL1 248 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 GALNT12Q8IXK2 581 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 CARFQ8N187 725 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 VWA5B2Q8N398 1253 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 CLIP4Q8N3C7 705 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC15A4Q8N697 577 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 AMER2Q8N7J2 671 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 PROKR2Q8NFJ6 384 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 OR6Q1Q8NGQ2 317 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 GPR151Q8TDV0 419 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 LMX1AQ8TE12 382 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC35B4Q969S0 331 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 ZG16BQ96DA0 208 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 CD180Q99467 661 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC38A3Q99624 504 aa9.74□□□□□ -0.85
POLR2J3-201ENST00000379340 MGLLQ99685 303 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms