RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 Q9N2J8 555 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 FAM120CQ9NX05 1096 aaKnown RBP15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 ZNF225Q9UK10 706 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 LIPT1Q9Y234 373 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 RNF115Q9Y4L5 304 aa15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 MAGED1Q9Y5V3 778 aaPredicted RBP15.9■□□□□ 0.14
PDLIM4-202ENST00000379018 ESYT3A0FGR9 886 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 A8MT66 165 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 NDUFB5O43674 189 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 CD5LO43866 347 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 TMCC2O75069 709 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 ADAM11O75078 769 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 SS18L1O75177 396 aaPredicted RBP15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 UTS2O95399 124 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 ANGPTL1O95841 491 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 KRT6AP02538 564 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 KRT6BP04259 564 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 HMOX2P30519 316 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 KRT6CP48668 564 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 HTR6P50406 440 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 GUCY2DQ02846 1103 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 TSNAXIP1Q2TAA8 658 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 CYP27C1Q4G0S4 372 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 TMEM158Q8WZ71 300 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 ACPTQ9BZG2 426 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 SLCO5A1Q9H2Y9 848 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 EQTNQ9NQ60 294 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 DDX18Q9NVP1 670 aaKnown RBP15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 STOML1Q9UBI4 398 aa15.89■□□□□ 0.13
PDLIM4-202ENST00000379018 A0A1W2PP18 115 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 NDUFS7O75251 213 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 SUPT7LO94864 414 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 IL33O95760 270 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 CD3EP07766 207 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 INHBAP08476 426 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 TIA1P31483 386 aaKnown RBP eCLIP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 PHBP35232 272 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 CLCQ05315 142 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 CSTF3Q12996 717 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 ZNHIT3Q15649 155 aaPredicted RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 PRSS53Q2L4Q9 553 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 GRAMD1BQ3KR37 738 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 CHRFAM7AQ494W8 412 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 ATG4DQ86TL0 474 aaPredicted RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 WDR75Q8IWA0 830 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 KBTBD8Q8NFY9 601 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 LILRB1Q8NHL6 650 aaPredicted RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 SMAP2Q8WU79 429 aaPredicted RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 NPAS1Q99742 590 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 MRPL57Q9BQC6 102 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 MRPL46Q9H2W6 279 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 MRTO4Q9UKD2 239 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 GPR52Q9Y2T5 361 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 CUBNO60494 3623 aa15.88■□□□□ 0.13
PDLIM4-202ENST00000379018 GXYLT2A0PJZ3 443 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 TLX2O43763 284 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 ZNF500O60304 480 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 ULK1O75385 1050 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 IGHV4-39P01824 125 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 TUBBP07437 444 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 ANXA4P09525 319 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 HSD3B1P14060 373 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 IL32P24001 234 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 HSD3B2P26439 372 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 NTSP30990 170 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 GABRA3P34903 492 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 C17orf67Q0P5P2 114 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 C2orf80Q0P641 193 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 RASA2Q15283 850 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 ETFDHQ16134 617 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 GLYR1Q49A26 553 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 SPIN4Q56A73 249 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 HBMQ6B0K9 141 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 MFSD12Q6NUT3 480 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 ADAM5Q6NVV9 412 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 APOOLQ6UXV4 268 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 HIPK1Q86Z02 1210 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 METTL6Q8TCB7 284 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 ROBO4Q8WZ75 1007 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 PIK3R3Q92569 461 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 HS6ST2Q96MM7 605 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 MIEF1Q9NQG6 463 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 NINJ2Q9NZG7 142 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 GDF2Q9UK05 429 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 CADP27708 2225 aa15.87■□□□□ 0.13
PDLIM4-202ENST00000379018 FREM1Q5H8C1 2179 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 ALPK2Q86TB3 2170 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 A8MV72 311 aaPredicted RBP15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 OVOL3O00110 214 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 UPK1AO00322 258 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 PHF1O43189 567 aaPredicted RBP15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 PTNP21246 168 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 AGTR1P30556 359 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 HSD17B3P37058 310 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 PSMD4P55036 377 aaKnown RBP15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 SLC7A5Q01650 507 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 SPDYAQ5MJ70 313 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 FIGNL1Q6PIW4 674 aa15.86■□□□□ 0.13
PDLIM4-202ENST00000379018 GPRIN3Q6ZVF9 776 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms