RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ZNF514Q96K75 400 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 GPA33Q99795 319 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SLC25A21Q9BQT8 299 aaPredicted RBP8.31□□□□□ -1.08
LIG3-202ENST00000378526 G6PC3Q9BUM1 346 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 SCML1Q9UN30 329 aa8.31□□□□□ -1.08
LIG3-202ENST00000378526 ELOA3CA0A087WX78 387 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 A0A1B0GVG6 124 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 GABRDO14764 452 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 MTHFD2P13995 350 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 IRF2P14316 349 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CDKN2BP42772 138 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 MARCKSL1P49006 195 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 TAF1AQ15573 450 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 GGNBP1Q5YKI7 109 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 FAM205BPQ63HN1 556 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 PLAG1Q6DJT9 500 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 FIBCD1Q8N539 461 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 OR4K15Q8NH41 348 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 OR14L1PQ8NHC6 308 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 UROC1Q96N76 676 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 POLDIP3Q9BY77 421 aaKnown RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 SLC25A51Q9H1U9 297 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 PHPT1Q9NRX4 125 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 IL20RAQ9UHF4 553 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 DNMT3AQ9Y6K1 912 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 CPS1P31327 1500 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 LRIT2A6NDA9 550 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 H0YIV9 168 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 MPPED1O15442 326 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 FOXD2O60548 495 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 CLIC3O95833 236 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 ETV4P43268 484 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 FHITP49789 147 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 ARNTL2Q8WYA1 636 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CMTM7Q96FZ5 175 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 TP53RKQ96S44 253 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 RIOX1Q9H6W3 641 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 MYEF2Q9P2K5 600 aaKnown RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 FKBPLQ9UIM3 349 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 A0A087WUU8 490 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 GABARAPH6UMI1 98 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 AQP7O14520 342 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 AOC2O75106 756 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 GABARAPO95166 117 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CT45A6P0DMU7 189 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CT45A5P0DMU8 189 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CT45A7P0DMV0 189 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CT45A8P0DMV1 189 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CT45A9P0DMV2 189 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 ZNF25P17030 456 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 ETFDHQ16134 617 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 FAM214AQ32MH5 1076 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CT45A2Q5DJT8 189 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CT45A1Q5HYN5 189 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 TMUB2Q71RG4 321 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 NIPA1Q7RTP0 329 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CT45A3Q8NHU0 189 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 LIPT1Q9Y234 373 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 EPHA1P21709 976 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 GABRR2P28476 465 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 SGCBQ16585 318 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 HAGHQ16775 308 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 GOLGA7Q7Z5G4 137 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 SLC51AQ86UW1 340 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 FBXO8Q9NRD0 319 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 C2orf42Q9NWW7 574 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CNOT2Q9NZN8 540 aaKnown RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 INTS6Q9UL03 887 aaKnown RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 TMEM150CB9EJG8 249 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 SIX6O95475 246 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 PMS2P2O95744 297 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 GCSHP23434 173 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 HLA-DMAP28067 261 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 PSMD8P48556 350 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 RHBDL3P58872 404 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 FAM69BQ5VUD6 431 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 OR52W1Q6IF63 320 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 IL20RBQ6UXL0 311 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 PGBD5Q8N414 524 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 UBL7Q96S82 380 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 LINC00597Q9H2U6 94 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 UCK1Q9HA47 277 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 A2ML1A8K2U0 1454 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 MEIS3P1A6NDR6 274 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 H3BQ06 376 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 TOX3O15405 576 aaPredicted RBP8.3□□□□□ -1.08
LIG3-202ENST00000378526 TK1P04183 234 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 CYP2B6P20813 491 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 AADACP22760 399 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 BCL7AQ4VC05 210 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 LCN8Q6JVE9 175 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 OR9A4Q8NGU2 314 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 GATA6Q92908 595 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 Q9N2J8 555 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 ZDHHC7Q9NXF8 308 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 TAS2R14Q9NYV8 317 aa8.3□□□□□ -1.08
LIG3-202ENST00000378526 ZNF256Q9Y2P7 627 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms