RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ISM1B1AKI9 464 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 CD8BP10966 210 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 MLLT3P42568 568 aaPredicted RBP23.61■■□□□ 1.37
C9orf40-201ENST00000376854 EVX1P49640 407 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 IL18Q14116 193 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 PUS10Q3MIT2 529 aaKnown RBP23.61■■□□□ 1.37
C9orf40-201ENST00000376854 OR7G2Q8NG99 324 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 COL26A1Q96A83 441 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 OTULINQ96BN8 352 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 RNF170Q96K19 258 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 YIPF2Q9BWQ6 316 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 BEX2Q9BXY8 128 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 PLA2G2FQ9BZM2 168 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 WDR70Q9NW82 654 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 TNFRSF10DQ9UBN6 386 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 SLC7A7Q9UM01 511 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 SOCS6O14544 535 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 GAAP10253 952 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 NDUFV2P19404 249 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 ZNF425Q6IV72 752 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 MFSD12Q6NUT3 480 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 METAP1DQ6UB28 335 aaPredicted RBP23.61■■□□□ 1.37
C9orf40-201ENST00000376854 NOXA1Q86UR1 476 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 SAMD8Q96LT4 415 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 TMEM246Q9BRR3 403 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 RMI1Q9H9A7 625 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 HINT3Q9NQE9 182 aaKnown RBP23.61■■□□□ 1.37
C9orf40-201ENST00000376854 SZT2Q5T011 3432 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 C2orf92A0A1B0GVN3 265 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 CDC42EP2O14613 210 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 HMGN1P05114 100 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 C5AR1P21730 350 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 CD83Q01151 205 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 RUNX3Q13761 415 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 C2orf27AQ580R0 203 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 VASNQ6EMK4 673 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 ZNF322Q6U7Q0 402 aaPredicted RBP23.6■■□□□ 1.37
C9orf40-201ENST00000376854 KLBQ86Z14 1044 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 CPOQ8IVL8 374 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 GANCQ8TET4 914 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 DNAJA4Q8WW22 397 aaPredicted RBP23.6■■□□□ 1.37
C9orf40-201ENST00000376854 MS4A4EQ96PG1 132 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 FCRL4Q96PJ5 515 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 B3GAT2Q9NPZ5 323 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 ASB6Q9NWX5 421 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 POLHQ9Y253 713 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 NOX1Q9Y5S8 564 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 FAM183AA6NL82 134 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 GCGRP47871 477 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 MZT2AQ6P582 158 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 DGLUCYQ7Z3D6 616 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 SIRT6Q8N6T7 355 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 SENP5Q96HI0 755 aaPredicted RBP23.6■■□□□ 1.37
C9orf40-201ENST00000376854 GDF15Q99988 308 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 MTHFD2LQ9H903 347 aaPredicted RBP23.6■■□□□ 1.37
C9orf40-201ENST00000376854 CACYBPQ9HB71 228 aaKnown RBP23.6■■□□□ 1.37
C9orf40-201ENST00000376854 PLSCR3Q9NRY6 295 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 WDR45Q9Y484 360 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 PCDHGB7Q9Y5F8 929 aa23.6■■□□□ 1.37
C9orf40-201ENST00000376854 ADH1BP00325 375 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 PSKH1P11801 424 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 CPN2P22792 545 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 EOGTQ5NDL2 527 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 CDC73Q6P1J9 531 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 ZNF836Q6ZNA1 936 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 CXXC5Q7LFL8 322 aaKnown RBP23.59■■□□□ 1.37
C9orf40-201ENST00000376854 ABI3BPQ7Z7G0 1075 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 PEX5LQ8IYB4 626 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 LRRC25Q8N386 305 aaPredicted RBP23.59■■□□□ 1.37
C9orf40-201ENST00000376854 C10orf90Q96M02 699 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 RBFOX1Q9NWB1 397 aaKnown RBP23.59■■□□□ 1.37
C9orf40-201ENST00000376854 YES1P07947 543 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 ZNF888P0CJ79 500 aaPredicted RBP23.59■■□□□ 1.37
C9orf40-201ENST00000376854 HLA-DMAP28067 261 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 CLDN2P57739 230 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 MZT2BQ6NZ67 158 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 GLCCI1Q86VQ1 547 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 LSRQ86X29 649 aaPredicted RBP23.59■■□□□ 1.37
C9orf40-201ENST00000376854 C7orf61Q8IZ16 206 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 TOR1AIP2Q8NFQ8 470 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 OR51G2Q8NGK0 314 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 RNF32Q9H0A6 362 aa23.59■■□□□ 1.37
C9orf40-201ENST00000376854 PRKAR1AP10644 381 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 SOX9P48436 509 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 RPS21P63220 83 aaKnown RBP23.58■■□□□ 1.37
C9orf40-201ENST00000376854 TATDN3Q17R31 274 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 B3GLCTQ6Y288 498 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 VN1R4Q7Z5H5 301 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 SIMC1Q8NDZ2 872 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 OR4E2Q8NGC2 313 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 GAL3ST3Q96A11 431 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 JAM3Q9BX67 310 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 C1QTNF2Q9BXJ5 285 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 UBQLN3Q9H347 655 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 ISG20L2Q9H9L3 353 aaKnown RBP23.58■■□□□ 1.37
C9orf40-201ENST00000376854 KRCC1Q9NPI7 259 aaPredicted RBP23.58■■□□□ 1.37
C9orf40-201ENST00000376854 ATG2BQ96BY7 2078 aa23.58■■□□□ 1.37
C9orf40-201ENST00000376854 TTC36A6NLP5 189 aa23.58■■□□□ 1.36
C9orf40-201ENST00000376854 KCNJ13O60928 360 aa23.58■■□□□ 1.36
C9orf40-201ENST00000376854 AGR2O95994 175 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms