RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ATG5Q9H1Y0 275 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 CXXC1Q9P0U4 656 aaPredicted RBP12.82□□□□□ -0.36
C9orf47-203ENST00000375851 IER3IP1Q9Y5U9 82 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 A8MV72 311 aaPredicted RBP12.82□□□□□ -0.36
C9orf47-203ENST00000375851 DISC1C4P0D8 188 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 SEC14L5O43304 696 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 SYPP08247 313 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 POLR2IP36954 125 aaKnown RBP12.82□□□□□ -0.36
C9orf47-203ENST00000375851 SNTB2Q13425 540 aaKnown RBP12.82□□□□□ -0.36
C9orf47-203ENST00000375851 ALG10Q5BKT4 473 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 LHX8Q68G74 356 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 LRRN1Q6UXK5 716 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 PELI3Q8N2H9 469 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 SLC15A4Q8N697 577 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 CASTOR1Q8WTX7 329 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 ACOT12Q8WYK0 555 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 DHRS1Q96LJ7 313 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 ADOQ96SZ5 270 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 BCL7BQ9BQE9 202 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 HDAC8Q9BY41 377 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 SAP130Q9H0E3 1048 aa12.82□□□□□ -0.36
C9orf47-203ENST00000375851 C13orf42A0A1B0GVH6 325 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 ALPLP05186 524 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 RAB3BP20337 219 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 OTX2P32243 289 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 FXYD6P3P58550 94 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 BTBD16Q32M84 506 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 TBRG1Q3YBR2 411 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 GDPGP1Q6ZNW5 385 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 THAP6Q8TBB0 222 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 BPIFA2Q96DR5 249 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 PGAM5Q96HS1 289 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 PITX2Q99697 317 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 TEX10Q9NXF1 929 aaPredicted RBP12.81□□□□□ -0.36
C9orf47-203ENST00000375851 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 GFRA2O00451 464 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 PNMTP11086 282 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 GTF2F2P13984 249 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 CXCR4P61073 352 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 MFSD13AQ14CX5 517 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 SPIN3Q5JUX0 258 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 TMEM184AQ6ZMB5 413 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 ZNF431Q8TF32 576 aaPredicted RBP12.81□□□□□ -0.36
C9orf47-203ENST00000375851 ALG8Q9BVK2 526 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 LRIT1Q9P2V4 623 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 L7N2F9 121 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 ACOT8O14734 319 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 HSPA12AO43301 675 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 IFNA7P01567 189 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 P04436 131 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 C21orf33P30042 268 aaPredicted RBP12.81□□□□□ -0.36
C9orf47-203ENST00000375851 GLP1RP43220 463 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 PSMA6P60900 246 aaKnown RBP12.81□□□□□ -0.36
C9orf47-203ENST00000375851 NAA11Q9BSU3 229 aaPredicted RBP12.81□□□□□ -0.36
C9orf47-203ENST00000375851 PDFQ9HBH1 243 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 TBX21Q9UL17 535 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 SRPK3Q9UPE1 567 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 LRRTM2O43300 516 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 MAS1P04201 325 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 FURINP09958 794 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 NPPBP16860 134 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 CRHBPP24387 322 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 PFN3P60673 137 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 CHRNEQ04844 493 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 PIP5KL1Q5T9C9 394 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 SLC18B1Q6NT16 456 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 ANKRD54Q6NXT1 300 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 PIWIL3Q7Z3Z3 882 aaKnown RBP12.81□□□□□ -0.36
C9orf47-203ENST00000375851 NXPE3Q969Y0 559 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 MS4A8Q9BY19 250 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 SLC6A15Q9H2J7 730 aa12.81□□□□□ -0.36
C9orf47-203ENST00000375851 S100A9P06702 114 aaKnown RBP12.8□□□□□ -0.36
C9orf47-203ENST00000375851 UCHL1P09936 223 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 ITGAMP11215 1152 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 GIPRP48546 466 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 EMX1Q04741 257 aaPredicted RBP12.8□□□□□ -0.36
C9orf47-203ENST00000375851 TMEM240Q5SV17 173 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 HENMT1Q5T8I9 393 aaKnown RBP12.8□□□□□ -0.36
C9orf47-203ENST00000375851 MFSD9Q8NBP5 474 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 IRF2BPLQ9H1B7 796 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 J3KTA2 159 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 HOXC11O43248 304 aaPredicted RBP12.8□□□□□ -0.36
C9orf47-203ENST00000375851 ZNF77Q15935 545 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 KCTD9Q7L273 389 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 TMEFF1Q8IYR6 380 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 TMEM102Q8N9M5 508 aaPredicted RBP12.8□□□□□ -0.36
C9orf47-203ENST00000375851 SPERTQ8NA61 448 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 SLC38A5Q8WUX1 472 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 ASB15Q8WXK1 588 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 TBC1D20Q96BZ9 403 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 TEX37Q96LM6 180 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 ASB16Q96NS5 453 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 OR51E2Q9H255 320 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 KNTC1P50748 2209 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 A0A1W2PQL4 384 aaPredicted RBP12.8□□□□□ -0.36
C9orf47-203ENST00000375851 H3BML4 177 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 SRPX2O60687 465 aaPredicted RBP12.8□□□□□ -0.36
C9orf47-203ENST00000375851 SLC6A8P48029 635 aa12.8□□□□□ -0.36
C9orf47-203ENST00000375851 CEBPGP53567 150 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms