RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 STACQ99469 402 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 MED11Q9P086 117 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 SLC17A7Q9P2U7 560 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 NDRG3Q9UGV2 375 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 BAIAP2L1Q9UHR4 511 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 EIF3LQ9Y262 564 aaKnown RBP17.09■□□□□ 0.33
TMEM53-201ENST00000372235 ZNF175Q9Y473 711 aa17.09■□□□□ 0.33
TMEM53-201ENST00000372235 A0A1W2PRB8 838 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 SLC22A20A6NK97 555 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 ALG1L2C9J202 215 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 SCAMP2O15127 329 aaKnown RBP17.08■□□□□ 0.32
TMEM53-201ENST00000372235 CTIFO43310 598 aaKnown RBP17.08■□□□□ 0.32
TMEM53-201ENST00000372235 NDUFB5O43674 189 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 SPAG7O75391 227 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 BPGMP07738 259 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 ZNF17P17021 662 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 PRPS1L1P21108 318 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 TBXA2RP21731 343 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 DNAJA1P31689 397 aaKnown RBP17.08■□□□□ 0.32
TMEM53-201ENST00000372235 STX5Q13190 355 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 SMU1Q2TAY7 513 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 XKR7Q5GH72 579 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 CPTPQ5TA50 214 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 ANKRD26P1Q6NSI1 321 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 MARCH3Q86UD3 253 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 CHDHQ8NE62 594 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-201ENST00000372235 HOXD1Q9GZZ0 328 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 NEUROD4Q9HD90 331 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 SSU72Q9NP77 194 aaKnown RBP17.08■□□□□ 0.32
TMEM53-201ENST00000372235 UBQLN4Q9NRR5 601 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 DUSP22Q9NRW4 184 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 CSMD1Q96PZ7 3565 aa17.08■□□□□ 0.32
TMEM53-201ENST00000372235 SCDO00767 359 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 MSTNO14793 375 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 PEX11AO75192 247 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 AGFG1P52594 562 aaKnown RBP17.07■□□□□ 0.32
TMEM53-201ENST00000372235 B3GALT5-AS1P59052 145 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 MFSD12Q6NUT3 480 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 CAMKMTQ7Z624 323 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 NUDCD3Q8IVD9 361 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 COX18Q8N8Q8 333 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 FNDC5Q8NAU1 212 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 ZNF527Q8NB42 609 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 OR56A1Q8NGH5 318 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 CLHC1Q8NHS4 586 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 FAM110BQ8TC76 370 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 ACTRT2Q8TDY3 377 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 OR5P2Q8WZ92 322 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 PIK3R3Q92569 461 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 ZBTB8AQ96BR9 441 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 GPATCH1Q9BRR8 931 aaKnown RBP17.07■□□□□ 0.32
TMEM53-201ENST00000372235 YIPF4Q9BSR8 244 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 MECRQ9BV79 373 aa17.07■□□□□ 0.32
TMEM53-201ENST00000372235 ZCCHC3Q9NUD5 404 aaKnown RBP17.07■□□□□ 0.32
TMEM53-201ENST00000372235 PDZD2O15018 2839 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 A0A1W2PQD3 144 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 CASKO14936 926 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 RGS16O15492 202 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-201ENST00000372235 KCNK2O95069 426 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 ATP6V1C1P21283 382 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 DNASE1P24855 282 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 ZNF41P51814 821 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-201ENST00000372235 ART1P52961 327 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 GRAMD1BQ3KR37 738 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 ZNF385BQ569K4 471 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 C6orf136Q5SQH8 315 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 MTERF4Q7Z6M4 381 aaKnown RBP17.06■□□□□ 0.32
TMEM53-201ENST00000372235 UBQLNLQ8IYU4 475 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 JADE3Q92613 823 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 TUBGCP3Q96CW5 907 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 GIMAP5Q96F15 307 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 FOXC2Q99958 501 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 SLC39A3Q9BRY0 314 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 FANCFQ9NPI8 374 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 FAF1Q9UNN5 650 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-201ENST00000372235 ZNF337Q9Y3M9 751 aa17.06■□□□□ 0.32
TMEM53-201ENST00000372235 A0A1W2PNV4 684 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 GXYLT2A0PJZ3 443 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 OR2M5A3KFT3 312 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 A8MXE2 369 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 TMEM233B4DJY2 109 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 H3BML4 177 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 H3BNH8 94 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 TM9SF1O15321 606 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 BIRC5O15392 142 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 TYROBPO43914 113 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 OXSR1O95747 527 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-201ENST00000372235 POU6F2P78424 691 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-201ENST00000372235 FOXF2Q12947 444 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 TP53BP2Q13625 1128 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 SGCBQ16585 318 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 KRT71Q3SY84 523 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 PDSS1Q5T2R2 415 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 ZCCHC23Q6ZST2 131 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 LUZP2Q86TE4 346 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 WDR75Q8IWA0 830 aaKnown RBP17.05■□□□□ 0.32
TMEM53-201ENST00000372235 GCNT2Q8N0V5 402 aa17.05■□□□□ 0.32
TMEM53-201ENST00000372235 METTL25Q8N6Q8 603 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms