RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 DEFB134Q4QY38 66 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 EIPR1Q53HC9 387 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 C6orf132Q5T0Z8 1188 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 NIPAL1Q6NVV3 410 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 ARMC6Q6NXE6 501 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 C1orf94Q6P1W5 598 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 IGF2-ASQ6U949 168 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 CASP12Q6UXS9 341 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 ARHGAP22Q7Z5H3 698 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 LACC1Q8IV20 430 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 SLC35F3Q8IY50 421 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 OR8J1Q8NGP2 316 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 SLC7A13Q8TCU3 470 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 SLC37A2Q8TED4 501 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 S100ZQ8WXG8 99 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TANKQ92844 425 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 NAT6Q93015 286 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 VMP1Q96GC9 406 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 C16orf58Q96GQ5 468 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 FCRL4Q96PJ5 515 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 RHNO1Q9BSD3 238 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 YIPF4Q9BSR8 244 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 SYNDIG1Q9H7V2 258 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 DOLKQ9UPQ8 538 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 HEMK1Q9Y5R4 338 aaPredicted RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 OR5K3A6NET4 321 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TMX2-CTNND1H3BSU7 103 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TNFSF15O95150 251 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 EPPINO95925 133 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 ATP1B1P05026 303 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 THBS1P07996 1170 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 CD36P16671 472 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 UGT2B10P36537 528 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TGFBR2P37173 567 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 SLC15A1P46059 708 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 SKP1P63208 163 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TUBA1BP68363 451 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 ST3GAL3Q11203 375 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 RUNX2Q13950 521 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TRAM2Q15035 370 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 OCLNQ16625 522 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 ARHGAP11BQ3KRB8 267 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 ENTPD8Q5MY95 495 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 SLC25A30Q5SVS4 291 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 PODNL1Q6PEZ8 512 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TUBA1AQ71U36 451 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TAF8Q7Z7C8 310 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 RBM45Q8IUH3 476 aaKnown RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 ARL14Q8N4G2 192 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 WDR36Q8NI36 951 aaKnown RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 ZNF675Q8TD23 568 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 GNPDA2Q8TDQ7 276 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 CCDC3Q9BQI4 270 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 LRRC61Q9BV99 259 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 PRRG3Q9BZD7 231 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 WDR12Q9GZL7 423 aaKnown RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 WDR70Q9NW82 654 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 HRASLS2Q9NWW9 162 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 ZNF232Q9UNY5 417 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 C19orf53Q9UNZ5 99 aaPredicted RBP13.11□□□□□ -0.31
LDB3-204ENST00000372066 B3GNT3Q9Y2A9 372 aa13.11□□□□□ -0.31
LDB3-204ENST00000372066 TDRD6O60522 2096 aaKnown RBP13.1□□□□□ -0.31
LDB3-204ENST00000372066 PMS2P1A4D2B8 440 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 H3BN98 237 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 LCKP06239 509 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 ALDH4A1P30038 563 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 TAS2R41P59536 307 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 ST3GAL4Q11206 333 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 PIN1Q13526 163 aaPredicted RBP13.1□□□□□ -0.31
LDB3-204ENST00000372066 LY6DQ14210 128 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 TCEA2Q15560 299 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 LTB4RQ15722 352 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 EXOSC6Q5RKV6 272 aaKnown RBP13.1□□□□□ -0.31
LDB3-204ENST00000372066 RNLSQ5VYX0 342 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 KLHL35Q6PF15 583 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 PEX5LQ8IYB4 626 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 CSNK1A1LQ8N752 337 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 MORN4Q8NDC4 146 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 B3GNT7Q8NFL0 401 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 OR7G2Q8NG99 324 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 OR4K5Q8NGD3 323 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 KAT2AQ92830 837 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 STACQ99469 402 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 POLDIP3Q9BY77 421 aaKnown RBP13.1□□□□□ -0.31
LDB3-204ENST00000372066 SEMA6CQ9H3T2 930 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 MTHFD2LQ9H903 347 aaPredicted RBP13.1□□□□□ -0.31
LDB3-204ENST00000372066 UCK1Q9HA47 277 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 SLC25A19Q9HC21 320 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 EQTNQ9NQ60 294 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 MAN2C1Q9NTJ4 1040 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 POMT2Q9UKY4 750 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 RPL36Q9Y3U8 105 aaKnown RBP13.1□□□□□ -0.31
LDB3-204ENST00000372066 KALRNO60229 2985 aa13.1□□□□□ -0.31
LDB3-204ENST00000372066 IRGMA1A4Y4 181 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 BLACEA4D250 179 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms