RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 GALNT9Q9HCQ5 603 aa12.59□□□□□ -0.39
SSR4-202ENST00000370085 SLC52A3Q9NQ40 469 aa12.59□□□□□ -0.39
SSR4-202ENST00000370085 WDR45Q9Y484 360 aa12.59□□□□□ -0.39
SSR4-202ENST00000370085 SHANK1Q9Y566 2161 aa12.59□□□□□ -0.39
SSR4-202ENST00000370085 A0A1W2PQD3 144 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 PINLYPA6NC86 204 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 ALG1L2C9J202 215 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 C5orf58C9J3I9 102 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 GNB5O14775 395 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 FADS1O60427 444 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 CDC40O60508 579 aaKnown RBP eCLIP12.58□□□□□ -0.4
SSR4-202ENST00000370085 SHOX2O60902 331 aaPredicted RBP12.58□□□□□ -0.4
SSR4-202ENST00000370085 TRAPPC6AO75865 159 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 OXSR1O95747 527 aaPredicted RBP12.58□□□□□ -0.4
SSR4-202ENST00000370085 IGKV1D-16P01601 117 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 MSX1P28360 303 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 PTPN6P29350 595 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 DCTP40126 519 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 MAGEA5P43359 124 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 CRISP3P54108 245 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 ATP12AP54707 1039 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 CASP6P55212 293 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 RGNQ15493 299 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 GPR68Q15743 365 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 TRMT5Q32P41 509 aaKnown RBP12.58□□□□□ -0.4
SSR4-202ENST00000370085 DESI1Q6ICB0 168 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 ARHGAP11AQ6P4F7 1023 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 MTERF4Q7Z6M4 381 aaKnown RBP12.58□□□□□ -0.4
SSR4-202ENST00000370085 PIGWQ7Z7B1 504 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 GALNT10Q86SR1 603 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 TMEM251Q8N6I4 163 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 ZNF614Q8N883 585 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 AURKBQ96GD4 344 aaPredicted RBP12.58□□□□□ -0.4
SSR4-202ENST00000370085 LRRC37BQ96QE4 947 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 CGREF1Q99674 301 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 THUMPD3Q9BV44 507 aaKnown RBP12.58□□□□□ -0.4
SSR4-202ENST00000370085 ZNF350Q9GZX5 532 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 TSPAN10Q9H1Z9 355 aaPredicted RBP12.58□□□□□ -0.4
SSR4-202ENST00000370085 SERHL2Q9H4I8 314 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 ZNF703Q9H7S9 590 aaPredicted RBP12.58□□□□□ -0.4
SSR4-202ENST00000370085 ZDHHC11Q9H8X9 412 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 PROK2Q9HC23 129 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 SLC6A13Q9NSD5 602 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 ARMCX1Q9P291 453 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 C15orf41Q9Y2V0 281 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 KCNE3Q9Y6H6 103 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 ZGRF1Q86YA3 2104 aa12.58□□□□□ -0.4
SSR4-202ENST00000370085 LOC100653049A0A140TA62 436 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 LRRC3CA6NJW4 275 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 FAM47E-STBD1D6RA91 191 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 GTPBP1O00178 669 aaKnown RBP12.57□□□□□ -0.4
SSR4-202ENST00000370085 MRASO14807 208 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 SUSD5O60279 629 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 HCN1O60741 890 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 KRT34O76011 436 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 UNC5CO95185 931 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 ANGPTL1O95841 491 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 ETFAP13804 333 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 PLA2G2AP14555 144 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 MST1P26927 711 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 TDGF1P3P51864 188 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 ESPL1Q14674 2120 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 GANABQ14697 944 aaKnown RBP12.57□□□□□ -0.4
SSR4-202ENST00000370085 ZNF630Q2M218 657 aaPredicted RBP12.57□□□□□ -0.4
SSR4-202ENST00000370085 GTDC1Q4AE62 458 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 COX20Q5RI15 118 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 LRRC74BQ6ZQY2 392 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 MARCH3Q86UD3 253 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 SIAH3Q8IW03 269 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 ZNF619Q8N2I2 560 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 METTL25Q8N6Q8 603 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 OR4C3Q8NH37 302 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 RNF138Q8WVD3 245 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 GNRHR2Q96P88 292 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 DEFB127Q9H1M4 99 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 MTHFD2LQ9H903 347 aaPredicted RBP12.57□□□□□ -0.4
SSR4-202ENST00000370085 ACKR4Q9NPB9 350 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 VAPAQ9P0L0 249 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 DKKL1Q9UK85 242 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 DTNAQ9Y4J8 743 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 GMEB1Q9Y692 573 aa12.57□□□□□ -0.4
SSR4-202ENST00000370085 DNAJC13O75165 2243 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 C2orf72A6NCS6 295 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 KIAA0513O60268 411 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 H6PDO95479 791 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 CBX6O95503 412 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 COX4I1P13073 169 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 ABOP16442 354 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 PTGDSP41222 190 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 DSCR4P56555 118 aaPredicted RBP12.56□□□□□ -0.4
SSR4-202ENST00000370085 IGFBP7Q16270 282 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 CMPK2Q5EBM0 449 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 RNFT1Q5M7Z0 435 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 GCNT6Q5T4J0 391 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 REP15Q6BDI9 236 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 DLEU7Q6UYE1 221 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 PEX5LQ8IYB4 626 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 EID3Q8N140 333 aa12.56□□□□□ -0.4
SSR4-202ENST00000370085 CCDC197Q8NCU1 140 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms