RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 KLHL28Q9NXS3 571 aa21.07■□□□□ 0.96
LDB1-201ENST00000361198 HYKKA2RU49 373 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 PRKYO43930 277 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 ATP1B1P05026 303 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 CCNYL3P0C7X3 344 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 BMP8BP34820 402 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 RORCP51449 518 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 RGS8P57771 180 aaPredicted RBP21.06■□□□□ 0.96
LDB1-201ENST00000361198 EFNB1P98172 346 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 PRICKLE2Q7Z3G6 844 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 PARGQ86W56 976 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 KIF18BQ86Y91 864 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 CA13Q8N1Q1 262 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 SETD6Q8TBK2 473 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 WDFY2Q96P53 400 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 SDF2Q99470 211 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 LRRC61Q9BV99 259 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 HOXD1Q9GZZ0 328 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 ZNF443Q9Y2A4 671 aaPredicted RBP21.06■□□□□ 0.96
LDB1-201ENST00000361198 SPACA6W5XKT8 324 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 CENPVL1A0A0U1RR11 272 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 SGK494L7N484 410 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 TLX2O43763 284 aaPredicted RBP21.06■□□□□ 0.96
LDB1-201ENST00000361198 ST3GAL3Q11203 375 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 GAS6Q14393 721 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 TRAM2Q15035 370 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 PHC2Q8IXK0 858 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 CCDC3Q9BQI4 270 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 EGLN3Q9H6Z9 239 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 TESQ9UGI8 421 aaKnown RBP21.06■□□□□ 0.96
LDB1-201ENST00000361198 TBC1D24Q9ULP9 559 aa21.06■□□□□ 0.96
LDB1-201ENST00000361198 DIMT1Q9UNQ2 313 aaKnown RBP21.06■□□□□ 0.96
LDB1-201ENST00000361198 GPR75O95800 540 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 SRFP11831 508 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 NT5EP21589 574 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 PCYT1AP49585 367 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 BLKP51451 505 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 CDK5Q00535 292 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 C1DQ13901 141 aaKnown RBP21.05■□□□□ 0.96
LDB1-201ENST00000361198 TMEM53Q6P2H8 277 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 NKAIN4Q8IVV8 208 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 ASB15Q8WXK1 588 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 TMCO6Q96DC7 493 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 PIGUQ9H490 435 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 C14orf119Q9NWQ9 140 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 NPAP1Q9NZP6 1156 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 CNIH4Q9P003 139 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 POMT2Q9UKY4 750 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 V9GYH0 126 aa21.05■□□□□ 0.96
LDB1-201ENST00000361198 FAM170BA6NMN3 283 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 THY1P04216 161 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 GPR68Q15743 365 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 AGAP6Q5VW22 663 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 ZNF836Q6ZNA1 936 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 PEX5LQ8IYB4 626 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 CELF2-AS1Q8N7Q2 184 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 TSTD1Q8NFU3 115 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 NR4A3Q92570 626 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 AGAP4Q96P64 663 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 TRIM45Q9H8W5 580 aaPredicted RBP21.04■□□□□ 0.96
LDB1-201ENST00000361198 IQCMA0A1B0GVH7 501 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 AP3D1O14617 1153 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 GSTT2P0CG29 244 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 GSTT2BP0CG30 244 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 GSTM3P21266 225 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 MLLT1Q03111 559 aaPredicted RBP21.04■□□□□ 0.96
LDB1-201ENST00000361198 PRICKLE4Q2TBC4 344 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 SYT14P1Q58G82 188 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 ARMC6Q6NXE6 501 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 ZNF730Q6ZMV8 503 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 GJD3Q8N144 294 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 DEFB119Q8N690 84 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 MCHR1Q99705 422 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 SEMA6CQ9H3T2 930 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 SLC2A4RGQ9NR83 387 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 CLCA2Q9UQC9 943 aa21.04■□□□□ 0.96
LDB1-201ENST00000361198 PLOD3O60568 738 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 CT62P0C5K7 136 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 MAZP56270 477 aaKnown RBP21.03■□□□□ 0.96
LDB1-201ENST00000361198 FAM46AQ96IP4 442 aaKnown RBP21.03■□□□□ 0.96
LDB1-201ENST00000361198 PHF7Q9BWX1 381 aaPredicted RBP21.03■□□□□ 0.96
LDB1-201ENST00000361198 LMAN1LQ9HAT1 526 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 MOV10Q9HCE1 1003 aaKnown RBP21.03■□□□□ 0.96
LDB1-201ENST00000361198 MAT2BQ9NZL9 334 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 SSR3Q9UNL2 185 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 ZNF232Q9UNY5 417 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 A0A087WV62 115 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 IGHV1OR15-9A0A0B4J2B8 117 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 MYL12BO14950 172 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 SSX4O60224 188 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 RDH16O75452 317 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 PSPHP78330 225 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 EXOSC7Q15024 291 aaKnown RBP21.03■□□□□ 0.96
LDB1-201ENST00000361198 EXOSC6Q5RKV6 272 aaKnown RBP21.03■□□□□ 0.96
LDB1-201ENST00000361198 PAQR6Q6TCH4 344 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 PLEKHM3Q6ZWE6 761 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 SPATC1Q76KD6 591 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 OR52I1Q8NGK6 324 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 OR9Q1Q8NGQ5 310 aa21.03■□□□□ 0.96
LDB1-201ENST00000361198 OR9A4Q8NGU2 314 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms