RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PSMB10P40306 273 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 DAP3P51398 398 aaKnown RBP17.36■□□□□ 0.37
SHANK1-202ENST00000359082 BDH1Q02338 343 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 ACBD4Q8NC06 268 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 TEPSINQ96N21 525 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 CPEB1Q9BZB8 566 aaKnown RBP17.36■□□□□ 0.37
SHANK1-202ENST00000359082 TSPAN10Q9H1Z9 355 aaPredicted RBP17.36■□□□□ 0.37
SHANK1-202ENST00000359082 RNF186Q9NXI6 227 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 HBQ1P09105 142 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 TCTE1Q5JU00 501 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF529Q6P280 563 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 PRSS48Q7RTY5 328 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 FAM83FQ8NEG4 500 aaPredicted RBP17.36■□□□□ 0.37
SHANK1-202ENST00000359082 OR13J1Q8NGT2 312 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 CSNK1G3Q9Y6M4 447 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 BDKRB2P30411 391 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 ABHD17BQ5VST6 288 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 STEAP4Q687X5 459 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 SFXN5Q8TD22 340 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 GCM1Q9NP62 436 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 ARPC5O15511 151 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 GPR37L1O60883 481 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 PAHP00439 452 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 SERPINA7P05543 415 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 SSX2Q16385 188 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 LCN8Q6JVE9 175 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 KIAA1211LQ6NV74 962 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 CMTM1Q8IZ96 169 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
SHANK1-202ENST00000359082 SUSD2Q9UGT4 822 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 PCDHA9Q9Y5H5 950 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 IER3IP1Q9Y5U9 82 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 DENRO43583 198 aaKnown RBP17.36■□□□□ 0.37
SHANK1-202ENST00000359082 DSC1Q08554 894 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 AAK1Q2M2I8 961 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 SGPP2Q8IWX5 399 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 FOXN4Q96NZ1 517 aa17.36■□□□□ 0.37
SHANK1-202ENST00000359082 PIGBOS1A0A0B4J2F0 54 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 LYRM1O43325 122 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 SLC22A5O76082 557 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 OPN1LWP04000 364 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 PROS1P07225 676 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 TAS2R20P59543 309 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 HTD2P86397 168 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF610Q8N9Z0 462 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 LPAR4Q99677 370 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 CACNG2Q9Y698 323 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 MYADML2A6NDP7 307 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 MT-CO2P00403 227 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 LCKP06239 509 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 ADARB1P78563 741 aaKnown RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 GPR50Q13585 617 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF852Q6ZMS4 543 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 PCDHGA7Q9Y5G6 932 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 HSBP1L1C9JCN9 74 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 AGPAT2O15120 278 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 SSTR4P31391 388 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 PIN1Q13526 163 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 TLDC1Q6P9B6 456 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 CPOQ8IVL8 374 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 C22orf15Q8WYQ4 148 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 APMAPQ9HDC9 416 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 AKAP12Q02952 1782 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 FAM208AQ9UK61 1670 aaKnown RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 ANKRD30BLA7E2S9 258 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF705FA8MVS1 300 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 NDUFB2O95178 105 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF705DP0CH99 300 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF705BP0CI00 300 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 RPP30P78346 268 aaKnown RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 CDK3Q00526 305 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 SLC35G1Q2M3R5 365 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 FAM3CQ92520 227 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 CDS1Q92903 461 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 MACROD1Q9BQ69 325 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 MAOBP27338 520 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 PRSS3P35030 304 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 RRAS2P62070 204 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 ARG2P78540 354 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 LETMD1Q6P1Q0 360 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 TSPYL5Q86VY4 417 aaPredicted RBP17.35■□□□□ 0.37
SHANK1-202ENST00000359082 SERPINA12Q8IW75 414 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 RPS10P5Q9NQ39 176 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 DNAJB11Q9UBS4 358 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 CACNA1FO60840 1977 aa17.35■□□□□ 0.37
SHANK1-202ENST00000359082 KLHL33A6NCF5 533 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 C2orf72A6NCS6 295 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 FRS3O43559 492 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 MAOAP21397 527 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 CRABP1P29762 137 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 GALNT1Q10472 559 aaPredicted RBP17.34■□□□□ 0.37
SHANK1-202ENST00000359082 TMEM135Q86UB9 458 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 OR51Q1Q8NH59 317 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 LMO3Q8TAP4 145 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 SFXN2Q96NB2 322 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 NME4O00746 187 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 LDB3O75112 727 aa17.34■□□□□ 0.37
SHANK1-202ENST00000359082 ZNF217O75362 1048 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms