RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SOWAHCQ53LP3 525 aaPredicted RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 KIAA1211LQ6NV74 962 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 LYPD4Q6UWN0 246 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 LHFPL5Q8TAF8 219 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 OR2A14Q96R47 310 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TRIB3Q96RU7 358 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF226Q9NYT6 803 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 TRDV1A0A1B0GX56 115 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CSO75390 466 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 HIST2H3PS2Q5TEC6 136 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 HFE2Q6ZVN8 426 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 LRP10Q7Z4F1 713 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CERS5Q8N5B7 392 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 OR52N2Q8NGI0 321 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 FBXW5Q969U6 566 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 ST6GAL2Q96JF0 529 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 NTPCRQ9BSD7 190 aaKnown RBP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 APMAPQ9HDC9 416 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 GPATCH2Q9NW75 528 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 CNIH4Q9P003 139 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PIM2Q9P1W9 311 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 FBXL21Q9UKT6 434 aa5.76□□□□□ -1.49
VPS13B-203ENST00000358544 PUS1Q9Y606 427 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS13B-203ENST00000358544 LEUTXA8MZ59 168 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SMIM6P0DI80 62 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ZBTB48P10074 688 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ACP2P11117 423 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 AKR1C4P17516 323 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 PTNP21246 168 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 MAP4K2Q12851 820 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CAMK2BQ13554 666 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 PCDHGA6Q9Y5G7 932 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 PRICKLE3O43900 615 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 FAM163BP0C2L3 166 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF823P16415 610 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM173Q86WV6 379 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 MALSU1Q96EH3 234 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SAMD11Q96NU1 681 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CPPED1Q9BRF8 314 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 TRMT61BQ9BVS5 477 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ACTRT3Q9BYD9 372 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 GOLGA2P5Q9HBQ8 144 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 KLRG2A4D1S0 409 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 LRIT2A6NDA9 550 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 RNF13O43567 381 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF250P15622 560 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 MAT2AP31153 395 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 BCL2A1Q16548 175 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 PRSS36Q5K4E3 855 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 TTC9Q92623 222 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 HAS2Q92819 552 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SLCO4A1Q96BD0 722 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SLC2A13Q96QE2 648 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 GPR20Q99678 358 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 RXFP3Q9NSD7 469 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ZDHHC3Q9NYG2 299 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SLAMF8Q9P0V8 285 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 NDOR1Q9UHB4 597 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SLC16A5O15375 505 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SRPX2O60687 465 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 FGF4P08620 206 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 AHCYP23526 432 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ISL1P61371 349 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 FAM209BQ5JX69 171 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 LETMD1Q6P1Q0 360 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 PLBD1Q6P4A8 553 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 OR5W2Q8NH69 310 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 LILRB1Q8NHL6 650 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CLEC4DQ8WXI8 215 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF566Q969W8 418 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 KIF13BQ9NQT8 1826 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ERI3O43414 337 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 HLA-AP01891 365 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 GLAP06280 429 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CDK2P24941 298 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 OR2B8PP59922 312 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 TTLL10Q6ZVT0 673 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ARHGAP12Q8IWW6 846 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 OR4M1Q8NGD0 313 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 NSMAFQ92636 917 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 VNN3Q9NY84 501 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 MAGEB4O15481 346 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 HTR3BO95264 441 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SEC61A1P61619 476 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SLC22A25Q6T423 547 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 LFNGQ8NES3 379 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 BPIFCQ8NFQ6 507 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 NLGN2Q8NFZ4 835 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SYNPRQ8TBG9 265 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 RAB39BQ96DA2 213 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 SAMD10Q9BYL1 202 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 C20orf85Q9H1P6 137 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF701Q9NV72 531 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CAMK2AQ9UQM7 478 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 CACNB4O00305 520 aaPredicted RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 RAB3DO95716 219 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 ADH1AP07327 375 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 NDUFV2P19404 249 aa5.75□□□□□ -1.49
VPS13B-203ENST00000358544 RPS19P39019 145 aaKnown RBP5.75□□□□□ -1.49
VPS13B-203ENST00000358544 MAGEA3P43357 314 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms