RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 C14orf28Q4W4Y0 310 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 MEX3BQ6ZN04 569 aaKnown RBP14.08□□□□□ -0.15
LMX1B-201ENST00000355497 ZNF679Q8IYX0 411 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 OR51Q1Q8NH59 317 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 COQ3Q9NZJ6 369 aa14.08□□□□□ -0.15
LMX1B-201ENST00000355497 LAMP1P11279 417 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 KEAP1Q14145 624 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 GK3PQ14409 553 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 NOXA1Q86UR1 476 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 OR9K2Q8NGE7 335 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 PPP1R35Q8TAP8 253 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 FRS2Q8WU20 508 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 MSI2Q96DH6 328 aaKnown RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF334Q9HCZ1 680 aaPredicted RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF223Q9UK11 482 aaPredicted RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 SLC6A5Q9Y345 797 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 PLEKHM1Q9Y4G2 1056 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 ARPC1BO15143 372 aaKnown RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 CA5AP35218 305 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 ETV5P41161 510 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 PEA15Q15121 130 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 TCTE1Q5JU00 501 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 NDUFAF5Q5TEU4 345 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF808Q8N4W9 903 aaPredicted RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 C12orf45Q8N5I9 185 aaPredicted RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF610Q8N9Z0 462 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 NLGN4YQ8NFZ3 816 aaPredicted RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 GPR148Q8TDV2 347 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 TRMT2BQ96GJ1 504 aaKnown RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF486Q96H40 463 aaPredicted RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 TMEM181Q9P2C4 612 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 RHBDD3Q9Y3P4 386 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 CAPNS1P04632 268 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 MC2RQ01718 297 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 MEF2DQ14814 521 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 NT5C3BQ969T7 300 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 SNX18Q96RF0 628 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF587Q96SQ5 575 aaPredicted RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 HEBP1Q9NRV9 189 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 THSD1Q9NS62 852 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 AK6Q9Y3D8 172 aaKnown RBP14.08□□□□□ -0.16
LMX1B-201ENST00000355497 DNAJC15Q9Y5T4 150 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 STYXL1Q9Y6J8 313 aa14.08□□□□□ -0.16
LMX1B-201ENST00000355497 FAM171A2A8MVW0 826 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 GCH1P30793 250 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 MRPS10P82664 201 aaKnown RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 ZXDBP98169 803 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 GDPGP1Q6ZNW5 385 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 MFFQ9GZY8 342 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 PLCXD1Q9NUJ7 323 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 FUOMA2VDF0 154 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 BPIP17213 487 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 TNFRSF1BP20333 461 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 SLC6A8P48029 635 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 ELAVL3Q14576 367 aaKnown RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 EIF4HQ15056 248 aaKnown RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 PROX2Q3B8N5 592 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 ABHD11Q8NFV4 315 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 OR9Q2Q8NGE9 314 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 MYLIPQ8WY64 445 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 PINK1Q9BXM7 581 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 OR51J1Q9H342 316 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 SFXN1Q9H9B4 322 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 MRC1P22897 1456 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 DCDC2BA2VCK2 349 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 ANKRD30BLA7E2S9 258 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 SRPX2O60687 465 aaPredicted RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 RAB5CP51148 216 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 PRAMEF8Q5VWM4 474 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 PRAMEF7Q5VXH5 474 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 COMMD6Q7Z4G1 85 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 PRRT1Q99946 306 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 SPATA6Q9NWH7 488 aaPredicted RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 TESQ9UGI8 421 aaKnown RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 LOC102723532A0A0G2JNH3 316 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 D6RAR5 112 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 HNRNPA1P09651 372 aaKnown RBP eCLIP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 HOXA9P31269 272 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 CNN3Q15417 329 aaKnown RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 CDHR3Q6ZTQ4 885 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 CPOQ8IVL8 374 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 BBS1Q8NFJ9 593 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 OR1J4Q8NGS1 313 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 ZMYND19Q96E35 227 aaPredicted RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 INPP5KQ9BT40 448 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 THAP7Q9BT49 309 aaPredicted RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 CRYZL1O95825 349 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 F2P00734 622 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 IL1RNP18510 177 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 SH3BP2P78314 561 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 IER5LQ5T953 404 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 LANCL3Q6ZV70 420 aa14.07□□□□□ -0.16
LMX1B-201ENST00000355497 ZNF551Q7Z340 670 aaPredicted RBP14.07□□□□□ -0.16
LMX1B-201ENST00000355497 SEC14L2O76054 403 aa14.06□□□□□ -0.16
LMX1B-201ENST00000355497 TMEM135Q86UB9 458 aa14.06□□□□□ -0.16
LMX1B-201ENST00000355497 APIPQ96GX9 242 aa14.06□□□□□ -0.16
LMX1B-201ENST00000355497 CNIH4Q9P003 139 aa14.06□□□□□ -0.16
LMX1B-201ENST00000355497 SUSD2Q9UGT4 822 aa14.06□□□□□ -0.16
LMX1B-201ENST00000355497 CD79AP11912 226 aa14.06□□□□□ -0.16
LMX1B-201ENST00000355497 ARSBP15848 533 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms