RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CAPN3P20807 821 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 GJA5P36382 358 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 CTSCP53634 463 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 EEF1A1P68104 462 aaKnown RBP17■□□□□ 0.31
COL18A1-202ENST00000355480 ZNF765Q7L2R6 523 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 FAM217AQ8IXS0 508 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 PIANPQ8IYJ0 282 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 USB1Q9BQ65 265 aaKnown RBP17■□□□□ 0.31
COL18A1-202ENST00000355480 RANBP3Q9H6Z4 567 aaPredicted RBP17■□□□□ 0.31
COL18A1-202ENST00000355480 IER3IP1Q9Y5U9 82 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 DNASE1P24855 282 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 PBX2P40425 430 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 ACTBP60709 375 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 ACTG1P63261 375 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 DCST2Q5T1A1 773 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 GPR157Q5UAW9 335 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 TMEM239Q8WW34 195 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 CDS1Q92903 461 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 SLC39A1Q9NY26 324 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 KLHL13Q9P2N7 655 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 TRAV18A0A075B6X5 111 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 GABBR2O75899 941 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 TMEM53Q6P2H8 277 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 ASRGL1Q7L266 308 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 CDC6Q99741 560 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 GSTO2Q9H4Y5 243 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 SACM1LQ9NTJ5 587 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 NALCNQ8IZF0 1738 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 OR2T1O43869 369 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 PVRP15151 417 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 CTBSQ01459 385 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 TP53I3Q53FA7 332 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 PGM2L1Q6PCE3 622 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 SFXN5Q8TD22 340 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 FRS2Q8WU20 508 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 MAFIPQ8WZ33 124 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 RDH14Q9HBH5 336 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 DNAJB11Q9UBS4 358 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 ATP6V1G1O75348 118 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 HMGN2P05204 90 aaKnown RBP17■□□□□ 0.31
COL18A1-202ENST00000355480 S100PP25815 95 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 PTH2RP49190 550 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 FOXA1P55317 472 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 MARVELD2Q8N4S9 558 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 PLEKHA3Q9HB20 300 aa17■□□□□ 0.31
COL18A1-202ENST00000355480 POLR2HP52434 150 aaKnown RBP16.99■□□□□ 0.31
COL18A1-202ENST00000355480 SLC7A9P82251 487 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 OR9A4Q8NGU2 314 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 TAS2R8Q9NYW2 309 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 TRBV11-1A0A0K0K1C0 115 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 C12orf71A8MTZ7 269 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 ADH6P28332 368 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 HOXC13P31276 330 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 EEF1A2Q05639 463 aaKnown RBP16.99■□□□□ 0.31
COL18A1-202ENST00000355480 FGL1Q08830 312 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 ARHGAP19Q14CB8 494 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 NAT6Q93015 286 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 ARL5BQ96KC2 179 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 ARL6Q9H0F7 186 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 PLEK2Q9NYT0 353 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 OR6C2Q9NZP2 312 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 UBQLN2Q9UHD9 624 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 HCFC2Q9Y5Z7 792 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 PDE4DIPQ5VU43 2346 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 MEGF11A6BM72 1044 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 CD34P28906 385 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 FXYD4P59646 89 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 ABHD12BQ7Z5M8 362 aaPredicted RBP16.99■□□□□ 0.31
COL18A1-202ENST00000355480 RTP3Q9BQQ7 232 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 ALG8Q9BVK2 526 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 PISDQ9UG56 409 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.99■□□□□ 0.31
COL18A1-202ENST00000355480 SDC1P18827 310 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 GLO1Q04760 184 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 PAGE3Q5JUK9 113 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 PPP1R3BQ86XI6 285 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 SDR9C7Q8NEX9 313 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 PPP1R35Q8TAP8 253 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 ADOQ96SZ5 270 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 RGCCQ9H4X1 137 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 SLC35A3Q9Y2D2 325 aa16.99■□□□□ 0.31
COL18A1-202ENST00000355480 MAGED1Q9Y5V3 778 aaPredicted RBP16.99■□□□□ 0.31
COL18A1-202ENST00000355480 VIRMAQ69YN4 1812 aaKnown RBP16.99■□□□□ 0.31
COL18A1-202ENST00000355480 ANKRD30BLA7E2S9 258 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 PENKP01210 267 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CTHP32929 405 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 PCGF2P35227 344 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CSNK1A1P48729 337 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 EXOSC7Q15024 291 aaKnown RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 ARL6IP1Q15041 203 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 ZNF704Q6ZNC4 412 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CNEP1R1Q8N9A8 125 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 KDM1BQ8NB78 822 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 SYNPO2LQ9H987 977 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CD93Q9NPY3 652 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 RABL2AQ9UBK7 228 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 RABL2BQ9UNT1 228 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 CSNK1G3Q9Y6M4 447 aa16.98■□□□□ 0.31
COL18A1-202ENST00000355480 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
COL18A1-202ENST00000355480 MROH6A6NGR9 719 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms