RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ANXA7P20073 488 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 UQCRC2P22695 453 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 PPP2R1BP30154 601 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 PTGER1P34995 402 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 CAPZA2P47755 286 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 EEF1A2Q05639 463 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SYPL1Q16563 259 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 FAM209BQ5JX69 171 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 FAM74A1Q5RGS3 127 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SPRYD7Q5W111 196 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 CD200R1LQ6Q8B3 271 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF322Q6U7Q0 402 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 TRMT11Q7Z4G4 463 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 CPOQ8IVL8 374 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ARIH2OSQ8N7S6 290 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 OR5D16Q8NGK9 328 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 TMEM159Q96B96 161 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ORAI3Q9BRQ5 295 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SPATA5L1Q9BVQ7 753 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 FAIM2Q9BWQ8 316 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SMG9Q9H0W8 520 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 GPN1Q9HCN4 374 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SLC6A20Q9NP91 592 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ISYNA1Q9NPH2 558 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 CA10Q9NS85 328 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 PRKAG2Q9UGJ0 569 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 UBE2QL1A1L167 161 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 CPSF4LA6NMK7 179 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 MCRIP1C9JLW8 97 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 DNASE2O00115 360 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SMAD9O15198 467 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SMAD6O43541 496 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 STX11O75558 287 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 UBXN7O94888 489 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SLC2A10O95528 541 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 NTN1O95631 604 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SLC16A8O95907 504 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 EGFP01133 1207 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 S100A9P06702 114 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 UCHL1P09936 223 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 HOXB3P14651 431 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 PSMB1P20618 241 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 GSTM3P21266 225 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 AHRP35869 848 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 RPL3P39023 403 aaKnown RBP7.16□□□□□ -1.26
BRCA1-201ENST00000352993 THPOP40225 353 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 GPR4P46093 362 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 AKR1C2P52895 323 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 AKR1C1Q04828 323 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 GRHL2Q6ISB3 625 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 APOOLQ6UXV4 268 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 TPGS1Q6ZTW0 290 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 C6orf120Q7Z4R8 191 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 OR10K1Q8NGX5 313 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 NANPQ8TBE9 248 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SLC22A8Q8TCC7 542 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ZFPM2Q8WW38 1151 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SORCS1Q8WY21 1168 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ING5Q8WYH8 240 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 NEIL2Q969S2 332 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ALG8Q9BVK2 526 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 OR51V1Q9H2C8 321 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 NOX3Q9HBY0 568 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 ASB6Q9NWX5 421 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 SAGE1Q9NXZ1 904 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 NTMQ9P121 344 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 LHX3Q9UBR4 397 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 DYRK1BQ9Y463 629 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 LOC285556D6RIA3 1793 aa7.16□□□□□ -1.26
BRCA1-201ENST00000352993 OR5K4A6NMS3 321 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 A8MXK9 166 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 RTCAO00442 366 aaKnown RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 SGCEO43556 437 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 UBL3O95164 117 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 CATP04040 527 aaKnown RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 PRG2P13727 222 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 IFNGR2P38484 337 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 HOXA1P49639 335 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 UBE2MP61081 183 aaKnown RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 SEC61A1P61619 476 aaKnown RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 RING1Q06587 406 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF280BQ86YH2 543 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 ACBD7Q8N6N7 88 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF433Q8N7K0 673 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 BMPERQ8N8U9 685 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 IL17RCQ8NAC3 791 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 OR4D9Q8NGE8 314 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 OR6T1Q8NGN1 323 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 OR5W2Q8NH69 310 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 TREX2Q9BQ50 279 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 SYNDIG1Q9H7V2 258 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 MED20Q9H944 212 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 TRIM36Q9NQ86 728 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 NDOR1Q9UHB4 597 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 PADI3Q9ULW8 664 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 PCDHB8Q9UN66 801 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 OR10H1Q9Y4A9 318 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 PTPRDP23468 1912 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 NPIPB15A6NHN6 443 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 SIGLEC6O43699 453 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms