RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 OR2T33Q8NG76 320 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 ZNF649Q9BS31 505 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 ACTR10Q9NZ32 417 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 NPAP1Q9NZP6 1156 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 GSTK1Q9Y2Q3 226 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 DNAJB6O75190 326 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 CH25HO95992 272 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 EGFP01133 1207 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 GAAP10253 952 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 NDUFV2P19404 249 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 HTR1FP30939 366 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 CD79BP40259 229 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 HYAL1Q12794 435 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 CRTC2Q53ET0 693 aaPredicted RBP20.62■□□□□ 0.89
UPF3A-201ENST00000351487 ABHD8Q96I13 439 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 KATNB1Q9BVA0 655 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 ABCB9Q9NP78 766 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 TMEM74BQ9NUR3 256 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 SATB2Q9UPW6 733 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 CENPVL1A0A0U1RR11 272 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 TRDV1A0A1B0GX56 115 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 CDC42EP2O14613 210 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 HMGN1P05114 100 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 IL7P13232 177 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 HNRNPA2B1P22626 353 aaKnown RBP20.61■□□□□ 0.89
UPF3A-201ENST00000351487 CTHP32929 405 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 FABP5Q01469 135 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 CARTPTQ16568 116 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 BAK1Q16611 211 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 AGAP6Q5VW22 663 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 RANBP3LQ86VV4 465 aaPredicted RBP20.61■□□□□ 0.89
UPF3A-201ENST00000351487 ZNF619Q8N2I2 560 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 RSC1A1Q92681 617 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 AGAP4Q96P64 663 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 TM9SF2Q99805 663 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 COQ7Q99807 217 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 PRSS27Q9BQR3 290 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 TRBV23OR9-2A0A075B6M9 112 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 A0A087WV62 115 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 RASGRP1O95267 797 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 ATP1B1P05026 303 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 KCNJ8Q15842 424 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 TRMT12Q53H54 448 aaKnown RBP20.61■□□□□ 0.89
UPF3A-201ENST00000351487 DDI2Q5TDH0 399 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 SPATC1Q76KD6 591 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 OR4F15Q8NGB8 312 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 OR52N1Q8NH53 320 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 AP3S1Q92572 193 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 ZFYVE21Q9BQ24 234 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 CD93Q9NPY3 652 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 TOR4AQ9NXH8 423 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 GRIP1Q9Y3R0 1128 aa20.61■□□□□ 0.89
UPF3A-201ENST00000351487 SCN2AQ99250 2005 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 A0A1W2PQL4 384 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-201ENST00000351487 TRAPPC13A5PLN9 417 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 LALBAP00709 142 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 POLR2CP19387 275 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-201ENST00000351487 ZNF155Q12901 538 aaPredicted RBP20.6■□□□□ 0.89
UPF3A-201ENST00000351487 GPR18Q14330 331 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 CCNJQ5T5M9 372 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 NRARPQ7Z6K4 114 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 LHFPL3Q86UP9 236 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 SYT14Q8NB59 555 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 PSD4Q8NDX1 1056 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 BRIX1Q8TDN6 353 aaKnown RBP20.6■□□□□ 0.89
UPF3A-201ENST00000351487 DUSP22Q9NRW4 184 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 CBLCQ9ULV8 474 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 REV3LO60673 3130 aa20.6■□□□□ 0.89
UPF3A-201ENST00000351487 LOC105369274A0A096LPK9 316 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 LOC102723532A0A0G2JNH3 316 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 CHST10O43529 356 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 AKAP8O43823 692 aaKnown RBP20.59■□□□□ 0.89
UPF3A-201ENST00000351487 STX11O75558 287 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 DBIP07108 87 aaKnown RBP20.59■□□□□ 0.89
UPF3A-201ENST00000351487 GCGRP47871 477 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 DCST2Q5T1A1 773 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 ARMC4Q5T2S8 1044 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 XKRXQ6PP77 449 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 GALNT12Q8IXK2 581 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 OR4N4Q8N0Y3 316 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 KLHL36Q8N4N3 616 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 ARIH2OSQ8N7S6 290 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 KIAA1143Q96AT1 154 aaPredicted RBP20.59■□□□□ 0.89
UPF3A-201ENST00000351487 MRGPRX1Q96LB2 322 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 ZNF223Q9UK11 482 aaPredicted RBP20.59■□□□□ 0.89
UPF3A-201ENST00000351487 ITGB1BP2Q9UKP3 347 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 CLCA2Q9UQC9 943 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 OR6C74A6NCV1 312 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 LRRTM2O43300 516 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 PLOD3O60568 738 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 IFI6P09912 130 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 NID1P14543 1247 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 AZGP1P25311 298 aaKnown RBP20.59■□□□□ 0.89
UPF3A-201ENST00000351487 ACSL1P33121 698 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 RFX2P48378 723 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 SRP54P61011 504 aaKnown RBP20.59■□□□□ 0.89
UPF3A-201ENST00000351487 GPR50Q13585 617 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 SHHQ15465 462 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 GPR68Q15743 365 aa20.59■□□□□ 0.89
UPF3A-201ENST00000351487 ALG11Q2TAA5 492 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms