RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ACTR6Q9GZN1 396 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 PRSS16Q9NQE7 514 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 KIAA1217Q5T5P2 1943 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 GABRR3A8MPY1 467 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 H3BML4 177 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 TUBA1BP68363 451 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 APOFQ13790 326 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 TUBA1AQ71U36 451 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF610Q8N9Z0 462 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SPTSSAQ969W0 71 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 BOD1Q96IK1 185 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SORBS1Q9BX66 1292 aaKnown RBP10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SLC6A16Q9GZN6 736 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 HIPK2Q9H2X6 1198 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 FOCADQ5VW36 1801 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 OR6C70A6NIJ9 312 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 L7N2F9 121 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 RLN2P04090 185 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 CD79AP11912 226 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 S100A1P23297 94 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 S100A7P31151 101 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 TIA1P31483 386 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLCN6-202ENST00000346436 VAMP2P63027 116 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 HNRNPA0Q13151 305 aaKnown RBP10.26□□□□□ -0.77
CLCN6-202ENST00000346436 REEP3Q6NUK4 255 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 LINC00696Q6ZRV3 163 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SPRED1Q7Z699 444 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 B3GNT8Q7Z7M8 397 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SARAFQ96BY9 339 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 CLEC1BQ9P126 229 aa10.26□□□□□ -0.77
CLCN6-202ENST00000346436 SULT2B1O00204 365 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 TNFRSF10CO14798 259 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 OR2T1O43869 369 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 GALR3O60755 368 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 OXSR1O95747 527 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 F11P03951 625 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 FCGR2AP12318 317 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 CCR7P32248 378 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 PBX2P40425 430 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 GABARAPL2P60520 117 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 SPIN3Q5JUX0 258 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 MARCH9Q86YJ5 346 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 MINDY2Q8NBR6 621 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 TSSK6Q9BXA6 273 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 ANKRA2Q9H9E1 313 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 ENPP5Q9UJA9 477 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 LOXL2Q9Y4K0 774 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 C11orf98E9PRG8 122 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 SCAMP2O15127 329 aaKnown RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 ATG12O94817 140 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 OR12D1P0DN82 309 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 DLSTP36957 453 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 PCBD1P61457 104 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 LIPIQ6XZB0 460 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 TBC1D15Q8TC07 691 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 MGLLQ99685 303 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF559Q9BR84 538 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 DNTTIP1Q9H147 329 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 FGF21Q9NSA1 209 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 UCKL1Q9NWZ5 548 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 LOC102725191A0A1B0GVB3 256 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 HTR1AP08908 422 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 SLC2A2P11168 524 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 RPL34P49207 117 aaKnown RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 SCRN3Q0VDG4 424 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 DEFB109BQ30KR1 87 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 C11orf91Q3C1V1 193 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 IQCF1Q8N6M8 205 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 DNAJA4Q8WW22 397 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 KCTD7Q96MP8 289 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 F2RL3Q96RI0 385 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 B3GNT4Q9C0J1 378 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 OR51E2Q9H255 320 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 MMP27Q9H306 513 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 MAGIXQ9H6Y5 334 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 A0A1W2PRQ8 180 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 H3BSH0 61 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 AP1G1O43747 822 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 UBL4AP11441 157 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 CCBE1Q6UXH8 406 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 SHFQ7M4L6 423 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 MRPL21Q7Z2W9 205 aaKnown RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 WDR53Q7Z5U6 358 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 OR8H1Q8NGG4 311 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 KCNN1Q92952 543 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 MAPKAP1Q9BPZ7 522 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 LMF2Q9BU23 707 aaKnown RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 CCDC86Q9H6F5 360 aaKnown RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 C1GALT1Q9NS00 363 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 GRIP1Q9Y3R0 1128 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 A0A0A6YYC8 382 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 C4orf47A7E2U8 309 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 I3L1I5 382 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 IRS1P35568 1242 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 RPS23P62266 143 aaKnown RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 NNATQ16517 81 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 NKPD1Q17RQ9 610 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 AGAP7PQ5VUJ5 663 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 PLEKHG7Q6ZR37 379 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms