RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TSSK2Q96PF2 358 aa18.38■□□□□ 0.53
HDAC4-201ENST00000345617 SYT7O43581 403 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 GSRP00390 522 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 SP3Q02447 781 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 PET117Q6UWS5 81 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 MOB1BQ7L9L4 216 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 OR51T1Q8NGJ9 327 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 PPP1R35Q8TAP8 253 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ZNF75AQ96N20 296 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 SEC22CQ9BRL7 303 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 TXNL4BQ9NX01 149 aaKnown RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 DRD5P21918 477 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 KANSL1Q7Z3B3 1105 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ADAMTS16Q8TE57 1224 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 FZD8Q9H461 694 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 APOBEC3GQ9HC16 384 aaKnown RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 SDR39U1Q9NRG7 319 aaPredicted RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 PLEKHJ1Q9NW61 149 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 PRSS55Q6UWB4 352 aaPredicted RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ANKK1Q8NFD2 765 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 SPRYD4Q8WW59 207 aaPredicted RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ASB17Q8WXJ9 295 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 CASD1Q96PB1 797 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 GORASP2Q9H8Y8 452 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 TLR9Q9NR96 1032 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 PER3P56645 1201 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 RANP62826 216 aaKnown RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 C1orf94Q6P1W5 598 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 OR4K1Q8NGD4 311 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 CERKQ8TCT0 537 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 BLACEA4D250 179 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 C17orf112F2Z3M2 114 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 GABRA3P34903 492 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ECH1Q13011 328 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 STEAP2Q8NFT2 490 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 OR2T11Q8NH01 316 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ENPP4Q9Y6X5 453 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 F5P12259 2224 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 SLC35E2BP0CK96 405 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 PTBP1P26599 531 aaKnown RBP eCLIP18.37■□□□□ 0.535e-7■■■■□ 20.9
HDAC4-201ENST00000345617 MLLT11Q13015 90 aaPredicted RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 SLC2A12Q8TD20 617 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ACOT11Q8WXI4 607 aaPredicted RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 PINK1Q9BXM7 581 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ARHGAP39Q9C0H5 1083 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 ELK1P19419 428 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 SYNPRQ8TBG9 265 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 OR6C2Q9NZP2 312 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 CPNE7Q9UBL6 633 aa18.37■□□□□ 0.53
HDAC4-201ENST00000345617 LSM5Q9Y4Y9 91 aaKnown RBP18.37■□□□□ 0.53
HDAC4-201ENST00000345617 LCKP06239 509 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 RAB30Q15771 203 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 TMPRSS7Q7RTY8 843 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 ASPGQ86U10 573 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 ADAM19Q9H013 955 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 OR51B5Q9H339 312 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 FAM162BQ5T6X4 162 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 PPP2R2DQ66LE6 453 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 LPCAT3Q6P1A2 487 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 CHD3Q12873 2000 aaKnown RBP18.36■□□□□ 0.53
HDAC4-201ENST00000345617 UBE2KP61086 200 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 AMZ1Q400G9 498 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 LRFN4Q6PJG9 635 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 MTHFD2LQ9H903 347 aaPredicted RBP18.36■□□□□ 0.53
HDAC4-201ENST00000345617 F6UZH7 168 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 OLFM2O95897 454 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 TANGO2Q6ICL3 276 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 PARP16Q8N5Y8 322 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 IMP4Q96G21 291 aaKnown RBP18.36■□□□□ 0.53
HDAC4-201ENST00000345617 DCAF13Q9NV06 445 aaKnown RBP18.36■□□□□ 0.53
HDAC4-201ENST00000345617 POP7O75817 140 aaKnown RBP18.36■□□□□ 0.53
HDAC4-201ENST00000345617 DFFBO76075 338 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 ESCO2Q56NI9 601 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 C22orf39Q6P5X5 142 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 RPS10-NUDT3A0A1W2PQS6 291 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 LRP5LA4QPB2 252 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 A8MVM7 634 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 C11orf98E9PRG8 122 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 RNASET2O00584 256 aaKnown RBP18.36■□□□□ 0.53
HDAC4-201ENST00000345617 MED6O75586 246 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 TK1P04183 234 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 PROS1P07225 676 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 RPS10P46783 165 aaKnown RBP18.36■□□□□ 0.53
HDAC4-201ENST00000345617 MLLT10P55197 1068 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 C4orf17Q53FE4 359 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 SLC35F2Q8IXU6 374 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 RNF141Q8WVD5 230 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 SPO11Q9Y5K1 396 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 ECM29Q5VYK3 1845 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 ARVCFO00192 962 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 ADORA3P0DMS8 318 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 GPR4P46093 362 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 RING1Q06587 406 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 HIST2H3PS2Q5TEC6 136 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 ZNF691Q5VV52 312 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 TRMT2BQ96GJ1 504 aaKnown RBP18.36■□□□□ 0.53
HDAC4-201ENST00000345617 PIGMQ9H3S5 423 aa18.36■□□□□ 0.53
HDAC4-201ENST00000345617 SLC22A23A1A5C7 686 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 KHNYNO15037 678 aaKnown RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 PRKAR1BP31321 381 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms