RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 SLC41A3Q96GZ6 507 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 PPP1R16AQ96I34 528 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 AICDAQ9GZX7 198 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 RNF32Q9H0A6 362 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 ENKD1Q9H0I2 346 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 MED28Q9H204 178 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 NUDT15Q9NV35 164 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 SPHK1Q9NYA1 384 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 WSB2Q9NYS7 404 aaPredicted RBP13.46□□□□□ -0.25
CPSF7-201ENST00000340437 GRXCR1A8MXD5 290 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 MAN2B1O00754 1011 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 FABP7O15540 132 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 ZNF780AO75290 641 aaPredicted RBP13.46□□□□□ -0.25
CPSF7-201ENST00000340437 MYOGP15173 224 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 PCDH1Q08174 1060 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 TSPAN31Q12999 210 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 FCN2Q15485 313 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 BHLHB9Q6PI77 547 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 OR8H3Q8N146 312 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 FBXL6Q8N531 539 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 OR4M1Q8NGD0 313 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 IFT27Q9BW83 186 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 CENPVL1A0A0U1RR11 272 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 TMEM129A0AVI4 362 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 ZSCAN5BA6NJL1 495 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 ASGR2P07307 311 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 PRG2P13727 222 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 TBXA2RP21731 343 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 HIST1H1TP22492 207 aaPredicted RBP13.46□□□□□ -0.26
CPSF7-201ENST00000340437 ERP29P30040 261 aaKnown RBP13.46□□□□□ -0.26
CPSF7-201ENST00000340437 MPIP34949 423 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 ANXA11P50995 505 aaKnown RBP13.46□□□□□ -0.26
CPSF7-201ENST00000340437 REEP5Q00765 189 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 ADAM15Q13444 863 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 HNRNPA1L2Q32P51 320 aaKnown RBP13.46□□□□□ -0.26
CPSF7-201ENST00000340437 CEACAM19Q7Z692 300 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 VWCEQ96DN2 955 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 LRIG1Q96JA1 1093 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 HCAR1Q9BXC0 346 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 SLC38A1Q9H2H9 487 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 SLC28A3Q9HAS3 691 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 ACSS1Q9NUB1 689 aaPredicted RBP13.46□□□□□ -0.26
CPSF7-201ENST00000340437 NOTCH4Q99466 2003 aa13.46□□□□□ -0.26
CPSF7-201ENST00000340437 IGKV1-8A0A0C4DH67 115 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 A0A1W2PPV9 198 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 E9PI62 339 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 MID1O15344 667 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 VEGFDO43915 354 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 SSTR2P30874 369 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 MAB21L1Q13394 359 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 C2orf27AQ580R0 203 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 RFPL4BQ6ZWI9 263 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 PFN4Q8NHR9 129 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 ORAI1Q96D31 301 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 CAMK1GQ96NX5 476 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 COQ7Q99807 217 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 THAP7Q9BT49 309 aaPredicted RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 ALG8Q9BVK2 526 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 PPIL3Q9H2H8 161 aaKnown RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 ACAD8Q9UKU7 415 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 GPR34Q9UPC5 381 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 CHST2Q9Y4C5 530 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 FAM186AA6NE01 2351 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 C17orf113A0A1B0GUU1 675 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 SLC31A1O15431 190 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 BMP7P18075 431 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 DRD5P21918 477 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 AGFG1P52594 562 aaKnown RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 PRDX1Q06830 199 aaKnown RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 GPR176Q14439 515 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 ELAVL3Q14576 367 aaKnown RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 ZNF658BQ4V348 819 aaPredicted RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 FIGNL1Q6PIW4 674 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 GDF7Q7Z4P5 450 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 TMEM43Q9BTV4 400 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 BTBD1Q9H0C5 482 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 PPP1R3EQ9H7J1 279 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 PELI2Q9HAT8 420 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 USP36Q9P275 1121 aaKnown RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 FBXL4Q9UKA2 621 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 NCKAP1Q9Y2A7 1128 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 WDR45Q9Y484 360 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 COL4A6Q14031 1691 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 A0A0G2JPF8 293 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 TRDV1A0A1B0GX56 115 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 HNRNPCL2B2RXH8 293 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 HNRNPCL3B7ZW38 293 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 ADH1CP00326 375 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 EIF4EP06730 217 aaKnown RBP13.45□□□□□ -0.26
CPSF7-201ENST00000340437 CISD3P0C7P0 127 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 HNRNPCL4P0DMR1 293 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 GZMKP49863 264 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 GAS1P54826 345 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 ABATP80404 500 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 PGGHGQ32M88 737 aa13.45□□□□□ -0.26
CPSF7-201ENST00000340437 GPR135Q8IZ08 494 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms