RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 IFNGR2P38484 337 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 MAP2K4P45985 399 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 MASP1P48740 699 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 CCL7P80098 99 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 EMX1Q04741 257 aaPredicted RBP11.54□□□□□ -0.56
ZNF548-201ENST00000336128 COX10Q12887 443 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 BIKQ13323 160 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 TUBA3CQ13748 450 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 DECR1Q16698 335 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 MFSD4BQ5TF39 518 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 AP1ARQ63HQ0 302 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 ZNF574Q6ZN55 896 aaPredicted RBP11.54□□□□□ -0.56
ZNF548-201ENST00000336128 QSOX2Q6ZRP7 698 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 PRICKLE2Q7Z3G6 844 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 MEX3DQ86XN8 651 aaKnown RBP11.54□□□□□ -0.56
ZNF548-201ENST00000336128 NKAIN4Q8IVV8 208 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 ZNF615Q8N8J6 731 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 FAM181AQ8N9Y4 354 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 C16orf52Q8NHV5 167 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 FAR1Q8WVX9 515 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 TSLPQ969D9 159 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 ITPAQ9BY32 194 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 ZNF304Q9HCX3 659 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 Q9N2J8 555 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 PSORS1C1Q9UIG5 152 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 PCDHGB1Q9Y5G3 927 aa11.54□□□□□ -0.56
ZNF548-201ENST00000336128 A0A1B0GX78 115 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 TOX3O15405 576 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 MPZL2O60487 215 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 BCAS1O75363 584 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 RPLP0P05388 317 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 GKN3PP0CG01 181 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 GSTM3P21266 225 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 HTR2AP28223 471 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 NUDT6P53370 316 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 SQSTM1Q13501 440 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 ARHGAP40Q5TG30 622 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 C1orf189Q5VU69 101 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 YOD1Q5VVQ6 348 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PTCHD4Q6ZW05 846 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 ALDH16A1Q8IZ83 802 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 SVOPQ8N4V2 548 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 EID2Q8N6I1 236 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 OR2I1PQ8NGU4 316 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 ZNF420Q8TAQ5 688 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PIGXQ8TBF5 258 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 ACOT11Q8WXI4 607 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 MPP4Q96JB8 637 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 SIGLEC11Q96RL6 698 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 DPYSL5Q9BPU6 564 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 NAA50Q9GZZ1 169 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PNO1Q9NRX1 252 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 SPTBP11277 2137 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 NUP210LQ5VU65 1888 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 IGKV3D-11A0A0A0MRZ8 115 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 A0A1W2PQM1 296 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 TTC36A6NLP5 189 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 ZNF99A8MXY4 864 aaPredicted RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PATE3B3GLJ2 98 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 AHCYL1O43865 530 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 INMTO95050 263 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 FADS2O95864 444 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 CT45A8P0DMV1 189 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 CT45A9P0DMV2 189 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PCSK6P29122 969 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 OMPP47874 163 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 GP2P55259 537 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PLAURQ03405 335 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 LSAMPQ13449 338 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 NNATQ16517 81 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 MINDY4Q4G0A6 757 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 CT45A2Q5DJT8 189 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PDZK1Q5T2W1 519 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PRSS48Q7RTY5 328 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 ARHGAP22Q7Z5H3 698 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 IQCF1Q8N6M8 205 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 TMEM105Q8N8V8 129 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 RCBTB1Q8NDN9 531 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 OR7G1Q8NGA0 311 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 GGHQ92820 318 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 C12orf43Q96C57 262 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 ZC3H10Q96K80 434 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 COPS4Q9BT78 406 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 POLR2J2Q9GZM3 115 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 ARMC7Q9H6L4 198 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 LIN28AQ9H9Z2 209 aaKnown RBP11.53□□□□□ -0.56
ZNF548-201ENST00000336128 FKBP14Q9NWM8 211 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 PRODH2Q9UF12 536 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 SLC7A7Q9UM01 511 aa11.53□□□□□ -0.56
ZNF548-201ENST00000336128 TRAPPC13A5PLN9 417 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 ENO4A6NNW6 628 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 A8MUA0 341 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 PIP5K1CO60331 668 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 ANKRD34CP0C6C1 535 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 RHAGQ02094 409 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 TSPAN31Q12999 210 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 CCDC81Q6ZN84 652 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 RRM2BQ7LG56 351 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 KIF18BQ86Y91 864 aa11.52□□□□□ -0.57
ZNF548-201ENST00000336128 TMEM151BQ8IW70 566 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms